CX671771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 336.265 bits (861), Expect = 1.233e-91 Identity = 173/241 (71.78%), Postives = 195/241 (80.91%), Query Frame = 1 Query: 85 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 MA QLTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL PKYTSIKPLGDRVLVKIK EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIG VIAVGPG LDEEG PL ++ G+TV+YSKYAG+DFKG DG+NYI Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYI 241
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 5.558e-76 Identity = 143/244 (58.61%), Postives = 182/244 (74.59%), Query Frame = 1 Query: 85 MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 MA LT++S + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+ AQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E T+GGLLL E+SKEKPS G V+A GPG LDEEGNR PL + GNTV+YSKYAG+DFKG DG++Y+ Sbjct: 1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYM 243
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23 Identity = 48/95 (50.53%), Postives = 72/95 (75.79%), Query Frame = 1 Query: 265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDE 549 IKPL DRV++K + EEKT+ G+++P TA+ KPQ G V+AVG G+ TK+++SVK G +V+Y KYAGTE+ +G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100 HSP 2 Score: 70.8626 bits (172), Expect = 9.659e-12 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 +KPL+DRV IK EE T GL + + +KEKP G VIAVGPG + E G + +S+ G+ V+Y KYAG + DG Y+ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRV-ENGTKIEMSVKEGDKVLYGKYAGTEIT-IDGEEYL 85
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYL 82
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYL 82
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYL 82
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.709e-22 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G +LI+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95 HSP 2 Score: 75.485 bits (184), Expect = 3.921e-13 Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 +LKPL DR+ IK+ EAEE T G++L E +KEKP G V+AVG G ++G++ + G+ V+YSK+AG++ + DG Y+ Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVE-VDGEEYL 83
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 80.4925 bits (197), Expect = 1.219e-14 Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHL 83
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 80.4925 bits (197), Expect = 1.219e-14 Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHL 83
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1 Query: 262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 75.0998 bits (183), Expect = 5.122e-13 Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K DG Y+ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYL 82 The following BLAST results are available for this feature:
BLAST of CX671771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671771 ID=CX671771; Name=CX671771; organism=Citrus sinensis; type=EST; length=806bpback to top |