CX671767

Overview
NameCX671767
Unique NameCX671767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-20
Identity = 79/226 (34.96%), Postives = 113/226 (50.00%), Query Frame = 1
Query:  148 KLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHN---ETLVNW-----KHIDSQSL----LGLTTTKEGDVVICDSKKGLFKVTEE--GVKVL--------DPDVRFANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            +L E  ++ PE  S+V     L+T T DG V    L N   ET+  +     K  D +      LG+     G + + D+ KGLF+V  +   VK+L           + F ND+    DG  +YFT SS+K+   D+   + EG   G+LL+YD  + +  VL +   F NGV LS +EDFV+V E+   R RR ++ G   G  D F EN+PG PDNI  +  G
Sbjct:   53 RLFENQLNGPE--SIVNIGDVLFTGTADGRVVK--LENGEIETIARFGSGPCKTRDDEPTCGRPLGIRVGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSG 274          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-20
Identity = 62/162 (38.27%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  304 LGLTTTKEGDVVICDSKKGLFKVT--EEGVKVL--------DPDVRFANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            LG+     G + + D+ KGLF+V   +  VK+L           + F ND+    DG  +YFT SS+K+   D+   + EG   G+LL+YD ++ +  VL +   F NGV LS  EDFV+V E    R RR+++ G   G  D F ENLPG PDNI  +  G
Sbjct:  152 LGIRAGPNGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTVTRDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFPNGVQLSPAEDFVLVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSG 313          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.946e-20
Identity = 79/226 (34.96%), Postives = 112/226 (49.56%), Query Frame = 1
Query:  148 KLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHN---ETLVNW-----KHIDSQSL----LGLTTTKEGDVVICDSKKGLFKVTEE--GVKVL--------DPDVRFANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            +L E  +S PE  S+V     L+T T DG V    L N   ET+  +     K  D +      LG+     G + + D+ KGLF+V  +   VK+L           + F ND+    DG  +YFT SS+K+   D+   + E    G+LL+YD  + +  VL +   F NGV LS +EDFV+V E+   R RR ++ G   G  D F EN+PG PDNI  +  G
Sbjct:   92 RLFENQLSGPE--SIVNIGDVLFTGTADGRVVK--LENGEIETIARFGSGPCKTRDDEPTCGRPLGIRAGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTVTRDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSG 313          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20
Identity = 61/162 (37.65%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  304 LGLTTTKEGDVVICDSKKGLFKVT--EEGVKVL--------DPDVRFANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            LG+     G + + D+ KGLF+V   +  VK+L          ++ F ND+    DG  +YFT SS+K+   D+   + EG   G+LL+YD  + +  VL +   F NGV LS  EDFV+V E+   R RR ++ G   G  D F EN+PG PDNI  +  G
Sbjct:  153 LGIRAGPNGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSG 314          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.959e-19
Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 1
Query:  304 LGLTTTKEGDVVICDSKKGLFKVT----------EEGVKVLDPDVRFANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            LG+     G + + D+  GLFKV             G  V    + F ND+    DG  +YFT SS+++   D+   + E    G++L+YD ++ + TVL E   FANG+ L  DE+ V+V E+   R RR  + G   G +DTF +NLPG PDNI  +  G
Sbjct:  153 LGIRVGPNGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSG 314          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.558e-19
Identity = 61/162 (37.65%), Postives = 83/162 (51.23%), Query Frame = 1
Query:  304 LGLTTTKEGDVVICDSKKGLFKVTEE--------GVKVL--DPDVRFANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            LG+       + + D+  GL++V             K L     + F ND+    DG  +YFT SS+K+   DF   + EG   G+LL+YD  + +  VL  G  F NGV LS  EDFV+V E+   R RRY++ G   G  D F EN+PG PDNI L+  G
Sbjct:  152 LGIRVGPNNTLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSG 313          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.300e-18
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 1
Query:  304 LGLTTTKEGDVVICDSKKGLFKV---TEEGVKVLDPDVR-------FANDVIDASDGT-LYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            LG+     G + + D+  GLF+V   T E   ++  + R       F ND+    DG  +YFT SS+++   DF   + E    G++L+YD ++ +  V+ E   F NG+ L  DE+ V+V E+   R +R  + G   G +DTF ENLPG PDNI  +  G
Sbjct:  152 LGIRVGPNGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLPGFPDNIRRSSSG 313          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16
Identity = 52/148 (35.14%), Postives = 74/148 (50.00%), Query Frame = 1
Query:  319 TKEGDVVICDSKKGLFKVTEEG---VKVLD-----PDVRFANDVIDASDGTLYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNI 738
            TK GD+ + D+  GL  +   G    K+ D     P +      +D + G +YFT  S+ + P D  K +A  +  G+  KYDP     TVL EG   + G A+S D  FV+V +  K   +RYW+KG + GT + F  N    PDNI
Sbjct:  108 TKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSEDFT-NSVSNPDNI 254          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14
Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  322 KEGDVVICDSKKGLFKVTEEG---VKVLDP----DVRFANDV-IDASDGTLYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNI 738
            K GD+ + D+  GL  ++  G    K+ D       +F + + +D + G +YFT  S++++P      +   +  G+L KYDP +   TVL EG   + G A+S D  FV+V +  K   +RYW+KG + G+ + F  N    PDNI
Sbjct:  107 KTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSEDFT-NSVSNPDNI 252          
BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: STSY_RAUSE (Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 1
Query:  427 IDASDGTLYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            +D   G +YFT  ST Y      + M   +  G+L+KYDP + +TT+L +  +   G  +S D  FV+V E    +  +YWL+G + GT +   + +P  P NI    DG
Sbjct:  155 VDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP-NPGNIKRNADG 262          
The following BLAST results are available for this feature:
BLAST of CX671767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APMAP_RAT2.314e-2034.96Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_BOVIN2.314e-2038.27Adipocyte plasma membrane-associated protein OS=Bo... [more]
APMAP_MOUSE3.946e-2034.96Adipocyte plasma membrane-associated protein OS=Mu... [more]
APMAP_HUMAN5.154e-2037.65Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_SALSA1.959e-1935.80Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_CHICK2.558e-1937.65Adipocyte plasma membrane-associated protein OS=Ga... [more]
APMAP_DANRE6.300e-1834.57Adipocyte plasma membrane-associated protein OS=Da... [more]
STS3_ARATH4.515e-1635.14Strictosidine synthase 3 OS=Arabidopsis thaliana G... [more]
STS1_ARATH1.897e-1432.65Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]
STSY_RAUSE7.460e-1133.64Strictosidine synthase OS=Rauvolfia serpentina GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_13A09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A09-A17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671767 ID=CX671767; Name=CX671767; organism=Citrus sinensis; type=EST; length=761bp
AGTGATTTGAAGCTCATGGCTCCGAAGAGTTTCCTGCTAGCTTGTTTACT
TGCTTTTACTCTACAATTCTTCTTCTCGCCTCCAGTATCATCTTCAGCTT
CTCTTCTTTCCACCTCCAAGGAAAGCTCCTCTATGAAGGATTTGATTAAA
CTTGGAGAAGGATGTGTGAGCCACCCAGAGGATGTTTCTGTTGTGGTTAG
AAAGGGTGCGCTGTATACAGCTACTAATGATGGTTGGGTCAAGTATTTCA
TCCTCCATAATGAAACCTTGGTTAATTGGAAGCACATAGACAGTCAATCT
CTTCTTGGACTCACAACAACAAAGGAAGGTGACGTCGTTATATGCGACAG
TAAAAAAGGTTTGTTTAAGGTTACCGAAGAAGGCGTAAAGGTTCTTGATC
CAGATGTAAGATTTGCAAATGATGTGATCGATGCATCAGATGGCACGTTG
TATTTTACTGTCTCAAGCACCAAATATACCCCCGCAGATTTCTACAAAGA
CATGGCTGAGGGAAATCCTTACGGCCAGTTGCTCAAATATGATCCTAAAT
CGAACCAAACAACAGTTTTGCAAGAGGGATTTTACTTTGCTAATGGCGTT
GCACTCTCAAAAGATGAAGACTTTGTGGTCGTTTGTGAATCATGGAAATT
CCGATGCAGAAGATATTGGCTGAAGGGCGATCGCAATGGAACATTAGATA
CTTTTGCTGAAAACCTTCCAGGTGGACCTGATAACATCAATCTTGCCCCC
GATGGCTCTTT
back to top