CX671739

Overview
NameCX671739
Unique NameCX671739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS11_ARATH (Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11 PE=2 SV=1)

HSP 1 Score: 421.394 bits (1082), Expect = 2.601e-117
Identity = 202/237 (85.23%), Postives = 216/237 (91.14%), Query Frame = 3
Query:   42 AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFPFEDGFLVRHHTKLEGGRKVYWAPQEGI 752
            AF  FM+GKAPQTILTD NMCLKEAIA EMP TKHALCIWM+V KFPSWFNA LGERYN+WKAEFYRLY+LES+E+FE+GWRDMVNSFGLHTNRHI NL+A R  W+LPYLRS+F AGMT TG SKAINAFIQRFL AQTRLAHFVEQVAV VDFKDQA EQQTMQQNLQNI LKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASF  ++G+LVRHHTKL+GGRKVYW PQEGI
Sbjct:  327 AFTGFMNGKAPQTILTDHNMCLKEAIAGEMPATKHALCIWMVVGKFPSWFNAGLGERYNDWKAEFYRLYHLESVEEFELGWRDMVNSFGLHTNRHINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFIQRFLSAQTRLAHFVEQVAVVVDFKDQATEQQTMQQNLQNISLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFQMDEGYLVRHHTKLDGGRKVYWVPQEGI 563          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS10_ARATH (Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana GN=FRS10 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.662e-37
Identity = 89/234 (38.03%), Postives = 132/234 (56.41%), Query Frame = 3
Query:   45 FLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFPFEDG-FLVRHHTKLEGGRKVYWAPQ 743
            F+ FM G+ PQTILTD +  LK+AI  EMP T H + +  IV K  SWF+  LG  Y E++A F  L    ++++FE  W  +V  FGL  +RH A L++ R  W    +R +F A   T+  + +I++F++R +   T +   +E+ A+ V      A+Q  +        LKT  PME HA  +LTP+AFS LQ ++VL+  YA     +G F+V H+ K+EG   V W P+
Sbjct:  343 FVRFMRGRHPQTILTDIDTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEFEQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVDGATCMQLLLEESALQVSAAASLAKQ--ILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNEMVLSVQYAVAEMANGPFIVHHYKKMEGECCVIWNPE 574          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22
Identity = 72/234 (30.77%), Postives = 117/234 (50.00%), Query Frame = 3
Query:   36 WL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNL-ESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDF---KDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLV-LAAHYASFPFEDGFLVRHHTKLEG 716
            WL   +LA M    P +I TD +  ++ AI    P  +H  C W I+ K     + V   ++  ++++F++  NL ES+EDFE  W  +++ + L  +  +  +++ R QW   YLR  FFA M+ T  S +IN++   ++ A T L+ F +    A++    K+  A+  TM        LKT +PME  A+ + T   F + QE+LV      AS   +DG LV +     G
Sbjct:  345 WLFNTWLAAMSAHPPVSITTDHDAVIRAAIMHVFPGARHRFCKWHILKKCQEKLSHVF-LKHPSFESDFHKCVNLTESVEDFERCWFSLLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFFKLYEKALESRLEKEVKADYDTMN---SPPVLKTPSPMEKQASELYTRKLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYG 574          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.047e-21
Identity = 59/212 (27.83%), Postives = 111/212 (52.36%), Query Frame = 3
Query:   36 WL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQL--VLAAH 656
            WL   +L  M G+AP+ ILTDQ+  L  A++  +P T+H   +W ++ K P +F+ V+ +R+  +  +F + ++   + ++F+M W  MV+ FGL  +  +  L   R +W   ++   F AGM+T+  S+++N+F  +++  +  L  F+ Q  V +  + +           +   LK+ +P E   A+  T   F K Q ++  V+A H
Sbjct:  321 WLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHVM-KRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHKKITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSPSPWEKQMATTYTHTIFKKFQVEVLGVVACH 531          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-16
Identity = 54/213 (25.35%), Postives = 106/213 (49.77%), Query Frame = 3
Query:   36 WL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-----LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAA 653
            WL  ++L  M G+ P+ +LTDQN  +K AIA  +P T+H  C+W ++ + P        + ++ W+  F +     +Y   S E+F+  W  +++ F L     + +L+  R  WA  ++R   FAG++    S+++N+   R++  +T L  F+E   + ++ + +   +       +   LK+ +P E     V +   F + Q +++ AA
Sbjct:  258 WLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNL-----DYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGLMLEDRYEEEAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAA 465          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16
Identity = 64/242 (26.45%), Postives = 116/242 (47.93%), Query Frame = 3
Query:   30 HHWL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQ-QNLQNICLKTGAPMESHAASVLTPFAFSKLQEQL--VLAAHYASFPFEDG----FLVRHHTKLEGGRK 725
            +HWL   +L+ M  ++PQTI+TD+   L+ AI+   P +     +  I+ K P     +    Y+  +  F + +Y    + +FE  W  MV++FG+  N  + +L+  R +WA  YL+  FFAG+      + +  F +R++  QT L  F+++  +A+  K +      ++ Q L    LKT    E+  + + T   F K Q ++  + +    +    DG    FLV+   + E  R+
Sbjct:  341 YHWLLKVWLSVMK-RSPQTIVTDRCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGL--HNYDAVRKAFTKAVYETLKVVEFEAAWGFMVHNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQTPLKEFLDKYELALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTRDMFKKFQIEVEEMYSCFSTTQVHVDGPFVIFLVKERVRGESSRR 579          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16
Identity = 53/209 (25.36%), Postives = 108/209 (51.67%), Query Frame = 3
Query:   30 HHWL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQV-AVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLV 644
            + WL   +L  + G+AP+ ++T+ ++ +   +    P T+H L +W +++K       V+ ++++ +  +F + +Y     EDF   W   +  FGL  ++ + +L+  R +WA  Y+     AGM+T+  + +INAF  +++  +T +  FV+    V  D  ++ A+  +   N Q   +K+ +P E   + V TP  F K Q +++
Sbjct:  328 YSWLMETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVV-KQHDNFMPKFEKCIYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRADSINAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKADSEMWNKQP-AMKSPSPFEKSVSEVYTPAVFKKFQIEVL 534          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 64/236 (27.12%), Postives = 112/236 (47.46%), Query Frame = 3
Query:   36 WL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMI-------VVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVD-FKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASF-PFEDG----FLVR 695
            WL   +L  M G+ P++I+ DQ++ +++A+    P   H    W I       ++ FPS           E+K E+ + +Y  ++I +F+  W  ++N +GL  +  +  ++  R  W   YLR++FFAG+   G    I  F    L A T L  F+ +   A++  +++  ++     NLQ   L+T  P+E     + T   F   Q +LV + +Y     +E+G    FLVR
Sbjct:  445 WLFQTWLRAMSGRRPRSIVADQDLPIQQALVQVFPGAHHRYSAWQIREKERENLIPFPS-----------EFKYEYEKCIYQTQTIVEFDSVWSALINKYGLRDDVWLREIYEQRENWVPAYLRASFFAGIPING---TIEPFFGASLDALTPLREFISRYEQALEQRREEERKEDFNSYNLQPF-LQTKEPVEEQCRRLYTLTVFRIFQNELVQSYNYLCLKTYEEGAISRFLVR 665          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.285e-15
Identity = 62/229 (27.07%), Postives = 109/229 (47.60%), Query Frame = 3
Query:   36 WL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVD-FKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASF-PFEDG----FLVR 695
            WL   +L  M G+ P++++ DQ++ +++A+A   P T H    W I  K        L    NE+K E+ + LY  ++  +F+  W  +VN +GL  N  +  ++  R +W   YLR++FF G+   G     + F    L + T L  F+ +    ++  +++  ++     NLQ   L+T  P+E     + T   F   Q +L  + +Y     +E+G    FLVR
Sbjct:  421 WLFQTWLRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKE----RENLRSFPNEFKYEYEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLRASFFGGIHVDG---TFDPFYGTSLNSLTSLREFISRYEQGLEQRREEERKEDFNSYNLQPF-LQTKEPVEEQCRRLYTLTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVR 641          
BLAST of CX671739 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15
Identity = 62/221 (28.05%), Postives = 105/221 (47.51%), Query Frame = 3
Query:   36 WL--AFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNL-ESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGM-TTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLV-LAAHYASFPFEDG 683
            WL   FL  M  + P +++TDQ+  ++ A     P  +H +  W ++ +       V    Y  ++ E Y   N  E+IE+FE  W  +++ + L  +  + +L+  R QW   Y R +FFA +  + G+S    +F   ++  QT L  F      A++   +   +  +        LKT +PME+ AA++ T   F K QE+LV   AH A+   +DG
Sbjct:  292 WLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQVFPGARHCINKWDVLREGQEKLAHVC-LAYPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGRHEWLNSLYNARAQWVPVYFRDSFFAAVFPSQGYS---GSFFDGYVNQQTTLPMFFRLYERAMESWFEMEIEADLDTVNTPPVLKTPSPMENQAANLFTRKIFGKFQEELVETFAHTANRIEDDG 508          
The following BLAST results are available for this feature:
BLAST of CX671739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FRS11_ARATH2.601e-11785.23Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis th... [more]
FRS10_ARATH2.662e-3738.03Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabi... [more]
FRS5_ARATH5.388e-2230.77Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
FAR1_ARATH2.047e-2127.83Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
FRS4_ARATH1.163e-1625.35Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis tha... [more]
FRS6_ARATH1.983e-1626.45Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis tha... [more]
FHY3_ARATH2.590e-1625.36Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidops... [more]
FRS12_ARATH5.770e-1627.12Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis th... [more]
FRS7_ARATH1.285e-1527.07Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis tha... [more]
FRS3_ARATH4.884e-1528.05Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H03-P6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671739 ID=CX671739; Name=CX671739; organism=Citrus sinensis; type=EST; length=752bp
AACAATATCTGAGTTTCAATCAAATGCGACATCACTGGTTGGCATTCCTA
GCATTTATGGATGGGAAGGCTCCACAGACAATATTAACTGACCAAAATAT
GTGTCTCAAAGAAGCCATAGCCATGGAAATGCCAGTGACTAAACATGCAC
TCTGCATATGGATGATTGTGGTGAAGTTTCCGTCCTGGTTTAATGCTGTT
CTTGGGGAGCGTTACAATGAGTGGAAGGCTGAGTTTTATCGGCTTTATAA
TCTAGAATCAATTGAGGACTTTGAAATGGGTTGGAGGGACATGGTCAATT
CATTTGGGCTTCATACTAACAGGCACATAGCCAACTTGTTTGCCTTGCGC
ATGCAGTGGGCATTACCATACTTAAGAAGCAATTTCTTTGCAGGAATGAC
TACAACTGGCCACTCAAAAGCTATTAATGCTTTCATTCAAAGGTTTTTGG
GTGCACAAACCCGGCTTGCACACTTTGTGGAACAAGTGGCTGTGGCTGTG
GATTTTAAAGATCAAGCTGCTGAACAACAGACAATGCAACAGAATCTCCA
AAACATTTGCCTGAAGACTGGCGCTCCAATGGAATCTCATGCTGCTTCAG
TCCTCACTCCTTTTGCTTTCTCTAAGCTTCAAGAGCAACTTGTTTTGGCT
GCTCATTATGCGTCTTTCCCCTTTGAAGATGGCTTCCTTGTAAGACACCA
CACAAAACTTGAAGGGGGCCGGAAAGTGTATTGGGCTCCACAGGAAGGCA
TC
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