CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5086 contig Csv1_Contig5086:1..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y1770_SYNY3 (Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803) GN=sll1770 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.181e-68
Identity = 125/265 (47.17%), Postives = 174/265 (65.66%), Query Frame = 2
Query:    5 GAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 799
            G  RDW  IY+EC  +L+QE DY +E  +A+ F  NF+  D+VKVP ++W YT+ QILT+EY+PGIKI+   +L+  G++RK L +    +YL Q+L+HGFFHADPHPGN+AV     G LIFYDFGMMG I+P+ +  L++T +GV EK+A++++ ++V +G L  T D   +RR+ QF L++F +                   KP         ++Q +  I +DL  IA DQPFRFPATFTFV+RAFS L+G+GKGLDP F
Sbjct:  213 GRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWVKVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNLAVSP-EAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALGALKETEDMGPIRRSVQFLLDNFMD-------------------KPF--------EEQSITKISDDLYEIAYDQPFRFPATFTFVMRAFSTLEGVGKGLDPDF 449          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y095_SYNY3 (Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803) GN=sll0095 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.819e-50
Identity = 100/258 (38.76%), Postives = 155/258 (60.08%), Query Frame = 2
Query:   26 AIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 799
            AIY E  S+L+ EIDY  E  NAE F  NF D   V+VP I+W+YTT  +LT+EY+PGIK++  Q+L+  G++   + +  + +YL+Q+L  GFF +DPHPGN+AVD  + G LIFYDFG M  +    ++ +++TF+ V  KD ++VL+A++ MG++ P GD + ++R   F L++F +                   KP+          +    +GE++ A+   QPFR P   TF++++ S LDGI + LDPR+
Sbjct:  197 AIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVPEIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFFQSDPHPGNMAVD--SQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLVEPKGDLSPIKRIINFLLDNFRD-------------------KPID--------IKAFDQVGEEVYAMFQQQPFRLPPQMTFILKSISTLDGIARALDPRY 425          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y005_SYNY3 (Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803) GN=sll0005 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.407e-39
Identity = 94/264 (35.61%), Postives = 141/264 (53.41%), Query Frame = 2
Query:   11 KRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGD-TTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 799
            + D VAI DE AS +++E++Y QEA N E FA  +  +  + VP+I+W+YT  ++LTME+V GIK+  I+++   G+D   L    V+  L Q+L HGFFHADPHPGN+    +  GRL + DFGMM +I P  R GL+E    +  +D D + +  V++  L P  D    +    Q F N+    +A           EL FK                 +I + + A+  + PFR PA +  ++R+   L+GI  G+DP F
Sbjct:  233 RSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVPSIYWQYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHADPHPGNLLA--MADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKLDFLKPDTDLKPIIPALGQVFGNALGASVA-----------ELNFK-----------------SITDQMSAMMYEFPFRVPAYYALIIRSMVTLEGIAIGIDPNF 466          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y1919_SYNY3 (Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803) GN=slr1919 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.698e-35
Identity = 85/261 (32.57%), Postives = 124/261 (47.51%), Query Frame = 2
Query:   17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 799
            D   I DE    L++EIDY  E  NAE FA NF     VKVP I+W+Y+  ++LT+E++ G K+     +   G+D   + R  V S L Q+L HGFFHADPHPGN+       GR+ + DFGMM  + P  +E +  +   +  KD   + +  + +G L P  D T +    +   N F   +         + Q+  FK                  I +D   +  D PFR PA F  ++R+    +G+   LDP F
Sbjct:  202 DLTLIVDEFGIKLFEEIDYLNEGRNAEKFAENFHGDAEVKVPCIYWQYSNQKVLTLEWIQGFKLTDTDKIRAAGLDPSDIIRIGVTSGLRQLLEHGFFHADPHPGNLFA--TLDGRMAYIDFGMMDQLEPGTKETIASSIVQLINKDYLALTEDFIALGFLAPNTDITPIIPALE---NVFGSAIGQ-------SVQDFNFK-----------------TITDDFSELMYDYPFRVPAKFALIIRSLVTQEGLALSLDPNF 433          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y1960_ARATH (Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.729e-29
Identity = 81/261 (31.03%), Postives = 125/261 (47.89%), Query Frame = 2
Query:   17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 799
            D + + DE A  +YQE++Y QEA NA  F   + D   V VP IFW+YT+ ++LTME+V G K+N   +++  G+    L    ++  L Q+L +GFFHADPHPGN+       G+L F DFGMM       R  ++     +  +D + + +    +  L P  D T +    + F   F++ L         T  EL FK                  + + L A+    PF  P  +  ++R+ +VL+G+    DP F
Sbjct:  279 DVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLA--TPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPIIPALRDF---FDDAL-------NYTVSELNFK-----------------TLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLALYADPNF 510          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y1181_ARATH (Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.563e-28
Identity = 81/261 (31.03%), Postives = 128/261 (49.04%), Query Frame = 2
Query:   17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 799
            D  A+ DE A+ L++E+DY  EA N   F   +  +  V VP ++ EY+T ++L ME+V G K+N +  L         L    V     Q+L +GF+HADPHPGN        G+L + DFGMMG   P +R+G +E    +  +D   + +  V +G+L PT + +AV +      + F++  A  R  R I+  +L                  L  +G+ +        FR P  F+ V+R+ +VL+GI  G+ P +
Sbjct:  251 DLEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEGQKLNEVNDL--------YLVEVGVYCSFNQLLEYGFYHADPHPGNFL--RTYDGQLAYLDFGMMGDFRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKA---LTDVFQD--AISRGVRNISFGDL------------------LGDLGKTMYRF----KFRIPPYFSLVIRSLAVLEGIAIGISPNY 474          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_CHRVO (Probable ubiquinone biosynthesis protein ubiB OS=Chromobacterium violaceum GN=ubiB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.239e-27
Identity = 80/208 (38.46%), Postives = 116/208 (55.77%), Query Frame = 2
Query:   14 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSK 637
            R+ VA +D+    L+ E+D   EAANA     NFK  D + VP +F++Y++ ++LT+E++ GI + +I+ L E GVD ++L R+ VE +  Q+  HGFFHAD HPGNI V     GR I  DFG++GS++   +  L   F   + +D  +V  A ++ G  VP  DT A            EE  AA R     T  E  F+KPLS+
Sbjct:  188 REVVAEFDK---YLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYDYSSREVLTLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHADMHPGNIFV--AADGRYIALDFGIVGSLTDTDKHYLAVNFLAFFNRDYHRVATAHIESG-WVPR-DTRA------------EELEAAVR-----TVCEPIFEKPLSE 371          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_BURXL (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia xenovorans (strain LB400) GN=ubiB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26
Identity = 62/167 (37.13%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   14 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPT 508
            R+ VA +D+    L+ E+D  +EAAN      NF  +D + VP ++WE+ TP +L ME + G+ I+++++L   GVD  +L R  VE +  Q+   GFFHAD HPGNI V  D  + GR I  DFG++G++S   +  L + F   +++D  +V    ++ G + PT
Sbjct:  187 REVVAEFDK---YLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPT 350          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_BURPP (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26
Identity = 62/167 (37.13%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   14 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPT 508
            R+ VA +D+    L+ E+D  +EAAN      NF  +D + VP ++WE+ TP +L ME + G+ I+++++L   GVD  +L R  VE +  Q+   GFFHAD HPGNI V  D  + GR I  DFG++G++S   +  L + F   +++D  +V    ++ G + PT
Sbjct:  187 REVVAEFDK---YLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPT 350          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_BURPS (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia pseudomallei GN=ubiB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.881e-26
Identity = 62/166 (37.35%), Postives = 97/166 (58.43%), Query Frame = 2
Query:   14 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            R+ VA +D+    L+ E+D  +EAAN      NF  +D + VP +FW+Y+TP +L ME + G+ I+++ +L   GVD  +L R  VE +  Q+   GFFHAD HPGNI V  D  + GR I  DFG++G++S   +  L + F   +++D  +V    ++ G + P
Sbjct:  187 REVVAEFDK---YLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349          
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
Y1770_SYNY37.181e-6847.17Uncharacterized protein sll1770 OS=Synechocystis s... [more]
Y095_SYNY38.819e-5038.76Uncharacterized protein sll0095 OS=Synechocystis s... [more]
Y005_SYNY32.407e-3935.61Uncharacterized protein sll0005 OS=Synechocystis s... [more]
Y1919_SYNY34.698e-3532.57Uncharacterized protein slr1919 OS=Synechocystis s... [more]
Y1960_ARATH1.729e-2931.03Uncharacterized aarF domain-containing protein kin... [more]
Y1181_ARATH5.563e-2831.03Uncharacterized aarF domain-containing protein kin... [more]
UBIB_CHRVO1.239e-2738.46Probable ubiquinone biosynthesis protein ubiB OS=C... [more]
UBIB_BURXL5.206e-2637.13Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
UBIB_BURPP5.206e-2637.13Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
UBIB_BURPS8.881e-2637.35Probable ubiquinone biosynthesis protein ubiB OS=B... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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