CX671691

Overview
NameCX671691
Unique NameCX671691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671691 vs. ExPASy Swiss-Prot
Match: Y5175_ARATH (UPF0706 protein At5g01750 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.789e-30
Identity = 60/92 (65.22%), Postives = 76/92 (82.61%), Query Frame = 3 
Query:    3 SVIQLKTTLNVYLASNTKQDVCDFKIKGSWTEKSCVVYAGESNTIVAQMHKKTTVGSVLLNKDRFTVTVYPNIDYAFIVALIVILDDINGDD 278
            S++QLKT L+V+L  N  +  CDF++KGSW E+SCVVYAGES+ IVAQMH+K TV SV L KD F+VTVYPN+DYAFI +L+VILDD+N +D
Sbjct:  123 SMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRED 214
The following BLAST results are available for this feature:
BLAST of CX671691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5175_ARATH2.789e-3065.22UPF0706 protein At5g01750 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12E12-J24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671691 ID=CX671691; Name=CX671691; organism=Citrus sinensis; type=EST; length=609bp
CTTCAGTGATCCAATTGAAGACCACTTTGAACGTCTACCTGGCAAGTAAC
ACCAAACAAGATGTTTGCGATTTCAAGATCAAAGGCAGCTGGACTGAAAA
ATCTTGTGTTGTATATGCTGGAGAATCAAACACAATTGTTGCCCAGATGC
ACAAAAAGACAACTGTGGGCAGTGTCTTGCTCAACAAGGACAGGTTCACT
GTGACAGTTTATCCGAACATAGACTATGCGTTTATAGTAGCCCTGATCGT
GATCCTCGATGATATCAACGGTGATGATGATACGAGTGAGATAATTTAGA
TTTGAAATTCCTACTATAAAGTGAAAAATAGTGTGTCTGTTTGATGTAAT
TCAAGTAAGATGCTGTATCCGTGGCTTTGGTTTTCCTTGATTTCAAAACC
CTTTGCAGTAGCCAGCTAGTTAAAAGTACTTTTGCTTTCAAAAAAAGGCT
ATAGCTATAGCTGTTTGTACGAGTCTTGCTTTTGTGGAGACTTTGTTGTT
TGGAAGCCATTGGGCTTGTAGTCAGATGGTCGGCTAGTGCTAGTAGACAC
GTTGTAAAATTAAAAGATGAATAATTAAAAAAAAAAAGAAGAAGGAAAGA
ATCCAATTC
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