CX671689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: HM13_HUMAN (Minor histocompatibility antigen H13 OS=Homo sapiens GN=HM13 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.438e-50 Identity = 105/200 (52.50%), Postives = 137/200 (68.50%), Query Frame = -3 Query: 263 WYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTRD------TARPFSMLGLGDIVIPGIFVALALRFDVSRGKGSR-YFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEFDESK----TAAVVSQESSDAKTSKKVE 829 WY +KHW+ANN GLAF + G+E+L L + TG ILL GLF+YD+FWVF T VMV+VAKSF+APIKL+FP +D A F+MLGLGD+VIPGIF+AL LRFD+S K + YF ++F Y GL LTI +M+ F+ AQPALLY+VPA IGF + GEV ++ ++ES A S+E ++A SK +E Sbjct: 175 WYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKLVFP-QDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASKGLE 373
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: HM13_MOUSE (Minor histocompatibility antigen H13 OS=Mus musculus GN=Hm13 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.659e-50 Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = -3 Query: 263 WYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTRD------TARPFSMLGLGDIVIPGIFVALALRFDVSRGKGSR-YFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEFDESK-----TAAVVSQESSDAKTSKKVE 829 WY +KHW+ANN GLAF + G+E+L L + TG ILL GLF+YDIFWVF T VMV+VAKSF+APIKL+FP +D A F+MLGLGDIVIPGIF+AL LRFD+S K + YF ++F Y GL LTI +M+ F+ AQPALLY+VPA IGF + GEV ++ ++ES +ES++A SK++E Sbjct: 175 WYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFP-QDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVAEMFSYEESNPKDPAAETESKEESTEASASKRLE 374
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: IMP2_CAEEL (Intramembrane protease 2 OS=Caenorhabditis elegans GN=imp-2 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.147e-37 Identity = 90/185 (48.65%), Postives = 111/185 (60.00%), Query Frame = -3 Query: 320 QKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTR------DTARPFSMLGLGDIVIPGIFVALALRFD-----------VSRG--KGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEFDESK 817 ++HW+ NN +G++F I GIE L L SFK G++LL GLF YDIFWVF T VM SVAK DAPI L FP A SMLGLGDIVIPGIF+AL RFD +G KG YF + Y GL +T+ VM+ F+AAQPALLY+VP + + GE+ L +DES+ Sbjct: 266 KRHWITNNIIGVSFSILGIERLHLASFKAGSLLLVGLFFYDIFWVFGTDVMTSVAKGIDAPILLQFPQDIYRNGIMEASKHSMLGLGDIVIPGIFIALLRRFDYRVVQTTAESKAPQGSLKGRYYFVVTVVAYMAGLFITMAVMHHFKAAQPALLYLVPCCLFVPLLLAVIRGELSALWNYDESR 450
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: YL8H_SCHPO (Probable intramembrane protease C25B8.17 OS=Schizosaccharomyces pombe GN=SPAC25B8.17 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.668e-31 Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = -3 Query: 332 IIAAIPGTFFCAWYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTRDTARPFSMLGLGDIVIPGIFVALALRFDV--------SRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEF 865 I A + +Y KHW+A+N L A I ++ + S+ TGA+LL LF YDI++VF T VMV+VA D P K + P SMLGLGDIV+PG+ +AL RFD+ K S YF++ F+ Y +GL +T + +F+AAQPALLY+ PA I + E+K L F Sbjct: 93 ITATMSSIAIALFYFKTKHWMASNILAWALAANSISIMRIDSYNTGALLLGALFFYDIYFVFGTEVMVTVATGIDIPAKYVLPQFKNPTRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFALYYFKAAQPALLYLSPACIVAPLLTAWYRDELKTLFSF 278
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: YKK0_YEAST (Probable intramembrane protease YKL100C OS=Saccharomyces cerevisiae GN=YKL100C PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27 Identity = 73/206 (35.44%), Postives = 113/206 (54.85%), Query Frame = -3 Query: 290 WYASQKHWLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTR-DTAR---PFSMLGLGDIVIPGIFVALALRFDVSR---------------GKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQL-------LEFDESKTAAVVSQESS 829 +Y S WL +N + + I I L L + K+GA++L LF YDI +VF T VMV+VA + D P+KL P + +TA+ FS+LGLGDI +PG+F+A+ ++D+ + +YF +A + Y LV ++ ++ F AQPALLYIVP+++ WN + KQ +E D+S A+ +E+S Sbjct: 322 FYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILIALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIAMCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALLYIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEKKENS 527
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: PSL1_MOUSE (Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = -3 Query: 350 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKSFD-------APIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 808 W+ +TLG+AFC+ ++ + L +FK +LL LF+YDIF+VF TP +MV VA P+ L P +T+ RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + Q QPALLY+VP + +W E+ Sbjct: 315 WVLQDTLGIAFCLYMLKTIRLPTFKACTLLLLVLFIYDIFFVFITPFLTKSGNSIMVEVATGPSNSSTHEKLPMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRIYFVACTIAYGLGLLVTFVALVLMQRGQPALLYLVPCTLLTSCTVALWRREL 488
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: PSL1_HUMAN (Signal peptide peptidase-like 2B OS=Homo sapiens GN=SPPL2B PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = -3 Query: 350 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKSFD-------APIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 808 W+ + LG+AFC+ ++ + L +FK +LL LF+YDIF+VF TP +MV VA P+ L P +++ RPFS+LG GDI++PG+ VA RFD+ YF + + Y VGL++T + + Q QPALLY+VP + A +W E+ Sbjct: 322 WVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRREL 495
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: PSL1_RAT (Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.100e-23 Identity = 63/174 (36.21%), Postives = 93/174 (53.45%), Query Frame = -3 Query: 350 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKSFD-------APIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 808 W+ +TLG+AFC+ + + L +FK +LL LFVYDIF+VF TP +MV VA P+ L P +T+ RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + + QPALLY+VP + +W E+ Sbjct: 315 WVLQDTLGIAFCLYMLRTIRLPTFKACTLLLLVLFVYDIFFVFITPYLTKSGNSIMVEVATGPSNSSTHEKLPMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRIYFVACTIAYGLGLLVTFVALVLMRHGQPALLYLVPCTLLTSCTVALWRREM 488
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: PSL1_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.679e-23 Identity = 58/174 (33.33%), Postives = 92/174 (52.87%), Query Frame = -3 Query: 350 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSF---------------DAPIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 808 W+ + LG+AFC+ ++ + L +FK +LL LFVYD+F+VF TP + +S P+ L P +++ RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + Q QPALLY+VP + + +W E+ Sbjct: 318 WVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFSVALWRKEL 491
BLAST of CX671689 vs. ExPASy Swiss-Prot
Match: PSL2_HUMAN (Signal peptide peptidase-like 2A OS=Homo sapiens GN=SPPL2A PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22 Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = -3 Query: 389 WLANNTLGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP--------VMVSVAKS-----------FDAPIKLLFPTRDTA-RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVI 808 W+ + LG+AFC+ I+ L L +FK+ ILL L +YD+F+VF TP +MV +A P + F P S+LG GDI++PG+ +A RFDV G Y+ S+ + Y +G++LT +V+ + QPALLY+VP + Sbjct: 314 WILQDILGIAFCLNLIKTLKLPNFKSCVILLGLLLLYDVFFVFITPFITKNGESIMVELAAGPFGNNEKLPVVIRVPKLIYFSVMSVCLMPVSILGFGDIIVPGLLIAYCRRFDVQTGSSYIYYVSSTVAYAIGMILTFVVLVLMKKGQPALLYLVPCTL 473 The following BLAST results are available for this feature:
BLAST of CX671689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671689 ID=CX671689; Name=CX671689; organism=Citrus sinensis; type=EST; length=867bpback to top |