CX671685

Overview
NameCX671685
Unique NameCX671685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.500e-58
Identity = 109/158 (68.99%), Postives = 127/158 (80.38%), Query Frame = -2
Query:  366 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 830
            GS EAE+M+ TI+ECE   + GE+KYCATSLESM+DFS SKLGK  V+A+STEV KK   MQ Y IAA GVK+++ DKSVVCHKQ YP+AVFYCH    T  Y VPLEG +G +AKA AVCH +TSAWNP HLAF+VLKVKPGTVP+CHFLPE H+VW
Sbjct:  232 GSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.573e-49
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = -2
Query:  366 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEV-KKGTKMQTYTIAAGVKQMAA----DKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 830
            GSVEA  M  T+++CE P  +GE+K CATSLESM+DF+TS LG S V+A ST V K+G+  Q YT+ A VK+ AA    D+ V CH + Y YAVF CH T+ TRAY V + G DGT  +A AVCH DT+ WNPKH+AFQVLKVKPGTVP+CHFLP+DH+VW
Sbjct:  266 GSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTA-VKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.520e-44
Identity = 86/159 (54.09%), Postives = 109/159 (68.55%), Query Frame = -2
Query:  366 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV--KKG-TKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 830
            GSV+A +++NT+ ECE P  KGE+K CATSLESM+DF  S LG + ++A ST +  K G T  Q YT+    +     + + CH ++YPYAVF CH T+ TRAY   L G DG   +A AVCHTDT+ WNPKH AFQVL VKPGTVP+CHF+  D +VW
Sbjct:  162 GSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.678e-41
Identity = 88/163 (53.99%), Postives = 111/163 (68.10%), Query Frame = -2
Query:  366 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAIST-----EVKKGTKMQTYTIAAGVKQMAADKSVV-CHKQNYPYAVFYCHATQ-TTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 830
            GS +A  M  T+++CE P  KGE+K CATSLES++DF TS  G S V A ST      V+  +  Q YT++ GV++MA    ++ CH ++YPYAVF CH T+ TTRAY   L G DGT  +A AVCHTDTS WNP+H AF VL VKPGTVP+CHF+  D +VW
Sbjct:  420 GSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVS-GVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.318e-35
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = -2
Query:  351 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKK 809
            M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ A          V CH + YPY V+ CH T  +RAY V +EGA G  A   AAVCHTDTS WNP+H++F++L  KPG  P+CH +P  HI+W  N K
Sbjct:  203 MEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKNVK 358          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.116e-34
Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = -2
Query:  357 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 809
            M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ +          V CH + YPY V+ CH T  +RAYMV +EGA G  A   A VCHTDTS WNP+H++F++L  KPG  P+CH +P  HI+W  N
Sbjct:  230 MEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKN 383          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.749e-33
Identity = 73/166 (43.98%), Postives = 104/166 (62.65%), Query Frame = -2
Query:  348 SVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEG---ADGTKA-KAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKT 827
            + EA  M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST  + G  +Q Y + A V  +     V CH Q YPY V+ CH T   RAYMV +EG    DG +A   A VCHT+TS WNP+H++F++L  KPG  P+CH +P  HIVW  N K+
Sbjct:  245 TAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVKS 409          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.770e-32
Identity = 78/162 (48.15%), Postives = 101/162 (62.35%), Query Frame = -2
Query:  357 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG--TKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 830
            GS  A+ M++T+ ECE     GE K CATSLESM++F+ S LG + V A+STEV +   T  Q Y + A     ++    V CH   Y YAVF CH T T  AY V L GADGTKA+A A CHTD +    +  A++ L V PG+VP+CHFLP+D ++WV N
Sbjct:   81 GSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHTT-TAAAYTVTLAGADGTKAEALAACHTDAAPRVAE--AYKRLGVAPGSVPVCHFLPQDDMLWVRN 239          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26
Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = -2
Query:  357 GSVEAEIMQNTIKECEDP--GIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV----KKGTKMQTYTIAA--GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 830
            GS  AE M+ T+ ECE    G + + K+C TSLESM++F+ + LG + ++A+STEV       T  Q YT+ A   V  ++    V CH   Y YAVF CH T  T AY V L GADGT+A+A A CH D  A+     A++ + V  G+VP+CH +P   ++WV N
Sbjct:  151 GSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNMVTCHGMPYAYAVFGCHTTTAT-AYAVTLAGADGTRAEALATCHGD--AFPGVAEAYERVGVAAGSVPVCHIMPLGDMLWVRN 314          
BLAST of CX671685 vs. ExPASy Swiss-Prot
Match: EA92_VICFA (Embryonic abundant protein USP92 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.699e-25
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = -2
Query:  357 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 788
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V PGTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRETTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259          
The following BLAST results are available for this feature:
BLAST of CX671685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
RD22_ARATH5.500e-5868.99Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ3.573e-4960.87BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP5_ORYSJ4.520e-4454.09BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ4.678e-4153.99BURP domain-containing protein 17 OS=Oryza sativa ... [more]
RAF1B_WHEAT1.318e-3545.51Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
RAF1A_WHEAT1.116e-3444.81Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURPD_ORYSJ2.749e-3343.98BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP6_ORYSJ6.770e-3248.15BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP8_ORYSJ4.250e-2642.51BURP domain-containing protein 8 OS=Oryza sativa s... [more]
EA92_VICFA4.699e-2542.07Embryonic abundant protein USP92 OS=Vicia faba PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12E07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12E07-J14-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671685 ID=CX671685; Name=CX671685; organism=Citrus sinensis; type=EST; length=831bp
TTTTTTTTTTTTTTTTTATAGTAACATTNTGGCTTTTAATTTCTAATTTT
GTCAATGATGGTTTGTTCATGGGATGATCATATTTATTTGATTCATGTGA
TCACAGGGATTTCTAATAGATTCACCAGCCAGCCGCAAAGTAAGACTGTG
AAGATAGCTCCATAAGTAGATAAGATAAATACTAGGCACACAAGTTTTGA
AGTACAGCAAGCTTAATGTATGCATAACAAATTGAACTGGGTATTCAAAG
TAAATTATTGTACAACTAAATGGATAACTGCTTGAACTGACTGATTCAAA
CTCTGCTGATTAAGTAGATGGGATAAGAGGATCAAATTCTATTCTCCAGT
CTTCTTATTGGGAACCCAGACAATGTGATCCTCAGGAAGGAAGTGACATA
TAGGAACAGTTCCTGGCTTAACTTTGAGCACTTGAAAAGCTAAATGCTTG
GGGTTCCATGCTGATGTATCTGTGTGGCAGACTGCTGCTGCTTTGGCTTT
TGTCCCATCAGCACCTTCCAAGGGAACCATGTAAGCCCTTGTGGTTTGTG
TTGCATGGCAGTAGAATACAGCATATGGATAGTTCTGCTTATGGCACACT
ACTGATTTGTCAGCTGCCATCTGCTTCACTCCAGCTGCGATTGTATATGT
CTGCATCTTGGTTCCTTTTTTTACCTCCGTAGAAATTGCCTGAACACTCT
TTCCAAGCTTAGAAGTGCTGAAGTCAATCATTGACTCCAGTGAAGTTGCA
CAATATTTCTGCTCTCCTTTAATGCCAGGGTCTTCACACTCTTTGATTGT
GTTCTGCATTATTTCAGCTTCAACTGATCCA
back to top