CX671666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671666 vs. ExPASy Swiss-Prot
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana GN=VPS41 PE=2 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 7.334e-62 Identity = 113/134 (84.33%), Postives = 125/134 (93.28%), Query Frame = 3 Query: 381 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFT-DEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKW 779 PRLKYQRMGG++P+LL+NDAASC+AVA RMIALGTH GTV ILD LGNQVKEF AHTA VND++FD +GEY+GSCSDDGSVVINSLFT DEKMKFDYHRPMKAISLDPDYT+K S+RFVAGGLAGHLY+NSKKW Sbjct: 42 PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDGSVVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVAGGLAGHLYMNSKKW 175
BLAST of CX671666 vs. ExPASy Swiss-Prot
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.251e-61 Identity = 119/169 (70.41%), Postives = 129/169 (76.33%), Query Frame = 3 Query: 273 MAPFPAENGVXXXXXXXXXXXXXXXXXXXXXXXXXXPRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKW 779 M+P P+ENG+ PRLKYQRMG S+PSLL+ DAA+C+AVAERMIALGTH G VHILDFLGNQVKEF AHTAAVNDL FD DGEYVGSCSDDGSVVINSLFTDE+MKF+YHRPMKAI+LDPDY R SRRFV GGLAG LYLN KKW Sbjct: 1 MSPKPSENGIDGDDERDEEEEDSEEEEAEEEEEDE-PRLKYQRMGASVPSLLSADAATCIAVAERMIALGTHGGAVHILDFLGNQVKEFAAHTAAVNDLCFDTDGEYVGSCSDDGSVVINSLFTDERMKFEYHRPMKAIALDPDYARTSSRRFVTGGLAGQLYLNVKKW 168
BLAST of CX671666 vs. ExPASy Swiss-Prot
Match: VPS41_HUMAN (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens GN=VPS41 PE=2 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 4.350e-22 Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 381 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKW 779 P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG V + L++ E+ + P+K I++ P + R ++FV GG L L + W Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGG--KKLLLFERSW 158
BLAST of CX671666 vs. ExPASy Swiss-Prot
Match: VPS41_MOUSE (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus GN=Vps41 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.266e-21 Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 381 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGG 743 P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG + + L++ E+ + P+K I++ P + R ++FV GG Sbjct: 27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDDSGEHMGVCSEDGKLQVFGLYSGEEFHETFDCPIKIIAVHPQFVRSSCKQFVTGG 147
BLAST of CX671666 vs. ExPASy Swiss-Prot
Match: VPS41_SCHPO (Vacuolar protein sorting-associated protein 41 OS=Schizosaccharomyces pombe GN=vps41 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 44/133 (33.08%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 381 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKW 779 P+L Y+R+ ND S A+++ G+H G ++I G +++ H+A+V DLS D++ E + SCS DG ++I+++ T E D+ RP+ ++++DP Y+ + SR+ ++GG AG + L+ K W Sbjct: 24 PKLIYERITEKFQGCFMNDTISACAISKEHFFFGSHNGAIYIYQKNGILLRKMILHSASVVDLSVDLESENLASCSMDGKMIISNITTRETTVHDFKRPLLSVAIDPYYSTRSSRQVLSGGRAGKVVLSEKGW 156
BLAST of CX671666 vs. ExPASy Swiss-Prot
Match: VPS41_YEAST (Vacuolar protein sorting-associated protein 41 OS=Saccharomyces cerevisiae GN=VPS41 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.295e-13 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 381 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKM-KFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKW 779 P LKY R+ + D+ S + A GTH+G +H+ +K H +++ L + DG+Y + S DG+V+I S+ + + ++D+ RP+ +++L ++ + SR FV+GG+AG + L+ + W Sbjct: 99 PLLKYTRISQLPKNFFQRDSISSCLFGDTFFAFGTHSGILHLTTCAFEPIKTIKCHRSSI--LCINTDGKYFATGSIDGTVIIGSMDDPQNITQYDFKRPINSVALHSNF--QASRMFVSGGMAGDVVLSQRNW 228 The following BLAST results are available for this feature:
BLAST of CX671666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671666 ID=CX671666; Name=CX671666; organism=Citrus sinensis; type=EST; length=779bpback to top |