CX671662

Overview
NameCX671662
Unique NameCX671662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5080 contig Csv1_Contig5080:1..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671662 vs. ExPASy Swiss-Prot
Match: DCP1_ARATH (mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana GN=At1g08370 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = -1
Query:  653 NAYSKVPQKSKVATSKSEFEELEAVPTMAVMDGPLESTPSNAADVPEDPAFVNFFSA 823
            +AYSKV QK K ++SKSEFEELEA PTMAVMDGPLE + S A D P+DPAFVNFFS+
Sbjct:  135 SAYSKVNQKPKASSSKSEFEELEAKPTMAVMDGPLEPS-STARDAPDDPAFVNFFSS 190          
The following BLAST results are available for this feature:
BLAST of CX671662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DCP1_ARATH3.334e-1573.68mRNA-decapping enzyme-like protein OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D07-H14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671662 ID=CX671662; Name=CX671662; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTATACCAATAATTTTTCCATAAAAAATACTGATTTG
AGTTGAAGCACTATACAAACTGGGTTTTATTACACTTGCAGAAAGCTACA
CGGTAGACAAAATCTAGCAGCTACATATTGGTATCACTTTCAGCTGGTCA
TGAATGGTGTGCATTCAGCAGTGCACAATAGACCATGTCTATGAATTGAT
TGTCCTGAACAAGCACCAGAAGTGCCTCTCGGACTTTCTCCTTGCTGATA
AATGGTCCACTGTTCCAAGTAAGAGCAGGAGTAAGAGATGGTGGAGGGAT
TGGTGGTGGAAACGGTTGAAGCACTGGGGCACCATATGGGCGTTGTAGAC
TCAAGGGAGTATTAAGTGGCAGAGCTGTTGGTGTAGATGAAGAGACAGGC
TGCATCATCCCCGCAGAGGAGGATGGAGGAGGAACAAAGAATAAGGAAGG
CTTTACAAGGTTAGGGGTAGGTGCTGACAGAGGTGGAGATGGTATTGCAA
GGTTGGCACGATAGGAGAAGCAACACTGGCGGGATGAGAAGGTAAAGAAA
TAGTTGTATTGGACTGGTAAGGTTGTGCAGAGATTGCTGCATTAGAAGTA
TTCCCCACAGTCAAAGCTGTTTATGTAGAAACATATTATTTCAAAGAAAA
CATGCACTGAAGAAGTTCACAAAAGCAGGATCTTCAGGAACATCAGCAGC
ATTTGAGGGAGTTGACTCTAGAGGACCATCCATAACTGCCATAGTTGGAA
CAGCTTCCAGTTCCTCAAACTCACTTTTAGATGTAGCAACTTTCGACTTT
TGAGGCACCTTGGAATATGCATT
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