CX671649

Overview
NameCX671649
Unique NameCX671649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5126 contig Csv1_Contig5126:58..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 4.228e-107
Identity = 186/201 (92.54%), Postives = 197/201 (98.01%), Query Frame = -3
Query:  289 GSKSYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSGED 891
            G+KSYPAYTDDPTVP GS+TPTF+AAALFI+NARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTD+DKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLY+++Y  EIPDAYERL+LDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKI PELYPYGSRGPVGAHYLAAK+NVRWGDLSG+D
Sbjct:  377 GAKSYPAYTDDPTVPNGSITPTFSAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDMDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYKAKYRGEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGDD 577          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.273e-103
Identity = 181/203 (89.16%), Postives = 193/203 (95.07%), Query Frame = -3
Query:  286 KGSKSYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSGEDS 894
            KG+KSY  YTDDPTVP  S+TPTFAAAALFI+NARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYK+ FGTDLDKATNELVLR+QPDEAIYLKINNKVPGLGMRLDR+DLNL Y +RY  EIPDAYERL+LDAIEGERRLFIRSD+LDAAW+LFTPLLKELEEKK+ PELYPYGSRGPVGAHYLAAK+NVRWGDLSGEDS
Sbjct:  372 KGNKSYSGYTDDPTVPNNSVTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKKTFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRTDLNLCYSTRYRGEIPDAYERLLLDAIEGERRLFIRSDKLDAAWSLFTPLLKELEEKKVAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGEDS 574          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 4.528e-101
Identity = 175/198 (88.38%), Postives = 187/198 (94.44%), Query Frame = -3
Query:  301 KGSKSYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDL 894
            KG K+YP YTDDPTVP  SLTPTFAAAA+FINNARWDGVPFLMKAGKALHT+ AEIRVQFRHVPGNLYK++F T+LD ATNELV+R+QPDE IYL+INNKVPGLGMRLDRSDLNLLYRSRYP EIPDAYERL+LDAIEGERRLFIRSDELDAAW LFTP LKELEEKKI+PELYPYGSRGPVGAHYLA+KYNVRWGDL
Sbjct:  376 KGGKTYPGYTDDPTVPNHSLTPTFAAAAMFINNARWDGVPFLMKAGKALHTRGAEIRVQFRHVPGNLYKKSFATNLDNATNELVIRVQPDEGIYLRINNKVPGLGMRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWDLFTPALKELEEKKIIPELYPYGSRGPVGAHYLASKYNVRWGDL 573          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD2_ARATH (Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 1.044e-97
Identity = 171/199 (85.93%), Postives = 187/199 (93.97%), Query Frame = -3
Query:  298 KGSKSYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLS 894
            KG  +YPAYTDD TVPKGSLTPTFAAAALFI+NARWDGVPFLMKAGKALHT+ AEIRVQFRHVPGNLY RN G+DLD+ATNELV+R+QPDEAIYLKINNKVPGLGMRLDRS+LNLLY +RY  EIPDAYERL+LDAIEGERRLFIRSDELDAAW+LFTPLLKE+EEKK +PE YPYGSRGPVGAHYLAAK+ V+WGD+S
Sbjct:  395 KGGVTYPAYTDDKTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTRSAEIRVQFRHVPGNLYNRNTGSDLDQATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKEIEEKKRIPEYYPYGSRGPVGAHYLAAKHKVQWGDVS 593          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 2.326e-97
Identity = 169/198 (85.35%), Postives = 186/198 (93.94%), Query Frame = -3
Query:  301 KGSKSYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDL 894
            KG  +YP YTDD TVPK SLTPTFAAAALFI+NARWDGVPFLMKAGKALHT+ AEIRVQFRHVPGNLY +NFG+DLD+ATNELV+R+QP+EAIYLKINNKVPGLGMRLDRS+LNLLY +RY  EIPDAYERL+LDAIEGERRLFIRSDELDAAW+LFTP+LKELE+KKIVPE YPYGSRGP+GAHYLAA+Y VRWGDL
Sbjct:  395 KGDVTYPGYTDDKTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTRSAEIRVQFRHVPGNLYNKNFGSDLDQATNELVIRVQPNEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLKELEDKKIVPEYYPYGSRGPIGAHYLAARYKVRWGDL 592          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD3_ARATH (Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2)

HSP 1 Score: 349.362 bits (895), Expect = 1.667e-95
Identity = 168/198 (84.85%), Postives = 183/198 (92.42%), Query Frame = -3
Query:  298 GSKSYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLS 891
            G  +YP+YTDD TVPKGSLTPTFAAAALFI+NARWDGVPFLMKAGKAL+T+ AEIRVQFRHVPGNLY RN GTD D+ TNELV+R+QPDEAIYLKINNKVPGLGMRLD+S+LNLLY +RY  EIPDAYERL+LDAIEGERRLFIRSDELDAAWALFTPLLKE+EEKK  PE YPYGSRGPVGAHYLAAK+ V+WGDLS
Sbjct:  399 GGVTYPSYTDDKTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALNTRSAEIRVQFRHVPGNLYNRNSGTDRDQTTNELVIRVQPDEAIYLKINNKVPGLGMRLDQSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIEEKKTTPEFYPYGSRGPVGAHYLAAKHKVQWGDLS 596          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.814e-61
Identity = 106/176 (60.23%), Postives = 138/176 (78.41%), Query Frame = -3
Query:  304 PTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKYNVRWGD 831
            PT+ AAAL+I+NARWDGVPFL++ G  L   R EI VQFRHVPGNLY+ N G ++D  TNEL+LR +PDEAI +KINNKVPGLG++LD S+LNLLY+ RY TE+PD+YE L+ D I+G+  LF+RSDE+ AAW + +P+L+E+++    PELY +G RGPV A+YL AK+ V W D
Sbjct:  449 PTYCAAALYIDNARWDGVPFLVRVGTGLIKHRVEIHVQFRHVPGNLYRENIGINIDLGTNELILRDEPDEAILVKINNKVPGLGLQLDASELNLLYKDRYKTEVPDSYEHLIHDVIDGDNHLFMRSDEVAAAWNILSPVLEEIDKHHTAPELYEFGGRGPVAAYYLWAKHGVPWAD 624          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD_DICDI (Glucose-6-phosphate 1-dehydrogenase OS=Dictyostelium discoideum GN=g6pd-1 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.638e-50
Identity = 95/186 (51.08%), Postives = 135/186 (72.58%), Query Frame = -3
Query:  322 PAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPT-EIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVGAHYLAAKY 876
            PAY DD  VPK S TPT+AAA   INN RW G+PF++K GKAL  ++ E+R+QF+     L+     +D D + NELV+R+QP EA+YLK+ +K PGL  ++++++L+L YR R+   ++PDAYERL+LD+I+G+  LF+R DELD AW +FTPLL ++E++KI PE Y +GSRGP  A  L+ K+
Sbjct:  297 PAYLDDEGVPKDSTTPTYAAAVFHINNPRWRGMPFILKCGKALDERKTEVRIQFKRPDNFLF-----SDDDISRNELVMRIQPGEAVYLKLLSKKPGLENKIEQTELDLSYRHRFENLDLPDAYERLILDSIKGDHNLFVRDDELDVAWQIFTPLLDQIEKEKIKPEPYSFGSRGPKSADELSKKF 477          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD_ASPNG (Glucose-6-phosphate 1-dehydrogenase OS=Aspergillus niger GN=gsdA PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.058e-49
Identity = 97/198 (48.99%), Postives = 138/198 (69.70%), Query Frame = -3
Query:  295 SYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEE-KKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSG 882
            S PAY +D TVP+ S  PTF A   +I N RWDGVPF+MKAGKAL+ ++ EIR+QFR V   ++K       D   NELV+R+QP+E++Y+K+N+K+PGL M+   ++L+L YR R+   +IP+AYE L+LDA++G+   F+R DELDA+W +FTPLL  L++ K+I+P  YPYGSRGP       A +  ++ D +G
Sbjct:  308 SKPAYKEDETVPQDSRCPTFCAMVAYIKNERWDGVPFIMKAGKALNEQKTEIRIQFRDVTSGIFK-------DIPRNELVIRVQPNESVYIKMNSKLPGLSMQTVVTELDLTYRRRFSDLKIPEAYESLILDALKGDHSNFVRDDELDASWRIFTPLLHYLDDNKEIIPMEYPYGSRGPAVLDDFTASFGYKFSDAAG 498          
BLAST of CX671649 vs. ExPASy Swiss-Prot
Match: G6PD_EMENI (Glucose-6-phosphate 1-dehydrogenase OS=Emericella nidulans GN=gsdA PE=3 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 4.022e-49
Identity = 97/198 (48.99%), Postives = 137/198 (69.19%), Query Frame = -3
Query:  295 SYPAYTDDPTVPKGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEE-KKIVPELYPYGSRGPVGAHYLAAKYNVRWGDLSG 882
            S PAY +D TVP+ S  PTF A    I N RWDGVPF+MKAGKAL+ ++ EIR+QF+ V   ++K       D   NELV+R+QP+E++Y+K+N+K+PGL M+   ++L+L YR R+   +IP+AYE L+LDA++G+   F+R DELDA+W +FTPLL  L++ K+I+P  YPYGSRGP       A Y  ++ D +G
Sbjct:  308 SKPAYKEDDTVPQDSRCPTFCALVAHIKNERWDGVPFIMKAGKALNEQKTEIRIQFKDVTSGIFK-------DIPRNELVIRVQPNESVYIKMNSKLPGLSMQTVVTELDLTYRRRFSDLKIPEAYESLILDALKGDHSNFVRDDELDASWRMFTPLLHYLDDNKEIIPMEYPYGSRGPSVLDDFTASYGYKFSDAAG 498          
The following BLAST results are available for this feature:
BLAST of CX671649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
G6PDC_SOLTU4.228e-10792.54Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PDC_SPIOL1.273e-10389.16Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD1_ARATH4.528e-10188.38Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PD2_ARATH1.044e-9785.93Glucose-6-phosphate 1-dehydrogenase 2, chloroplast... [more]
G6PDC_TOBAC2.326e-9785.35Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD3_ARATH1.667e-9584.85Glucose-6-phosphate 1-dehydrogenase 3, chloroplast... [more]
G6PD4_ARATH7.814e-6160.23Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD_DICDI3.638e-5051.08Glucose-6-phosphate 1-dehydrogenase OS=Dictyosteli... [more]
G6PD_ASPNG1.058e-4948.99Glucose-6-phosphate 1-dehydrogenase OS=Aspergillus... [more]
G6PD_EMENI4.022e-4948.99Glucose-6-phosphate 1-dehydrogenase OS=Emericella ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C12-F24-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671649 ID=CX671649; Name=CX671649; organism=Citrus sinensis; type=EST; length=896bp
TTTTTTTTTTATTCACAAATCTTAAATTTCCTTTTATATGCCTATTATTA
TTCACCTGTTTACACTGATCACCAACTTACAATCAAAATCAAATCATTCA
ACCTTCCAAATGATACATCATCCATAAGAATTCAATCCTCGGTACCAAGT
AGGTCAAGGAATATTGCGCCATAGCACAAATTATCAGGCACCGGAATGAG
AACTGCTGTGCTGTTCATATAACCAGCCCTGTCATGGGTTTATGGTGAAT
AAGTATGTAAAATAACCCAAGTTTTTGGCCATTCATGAATCCTCTCCACT
AAGATCTCCCCATCGGACATTGTACTTGGCAGCAAGATAATGTGCTCCAA
CTGGTCCTCGGCTACCATAAGGATAGAGCTCTGGAACAATCTTCTTCTCT
TCAAGTTCCTTCAGTAATGGTGTAAACAACGCCCAGGCAGCATCAAGCTC
ATCACTCCGAATAAACAACCTCCGTTCACCTTCTATTGCATCTAAGACCA
GCCTCTCATATGCATCTGGTATTTCTGTTGGATACCTTGATCGATAAAGC
AAATTAAGGTCACTGCGATCCAATCTCATTCCAAGACCAGGAACTTTGTT
GTTGATCTTCAGGTATATAGCCTCATCAGGCTGGAGTCGGAGCACAAGCT
CATTTGTAGCCTTGTCTAAGTCAGTTCCAAAATTCCGCTTGTACAGGTTT
CCAGGGACATGTCTGAACTGAACTCTGATCTCTGCACGTTTGGTATGGAG
CGCTTTGCCTGCTTTCATCAGGAAAGGAACCCCATCCCATCTTGCATTGT
TGATAAAAAGAGCAGCCGCGGCAAATGTTGGCGTGAGACTACCCTTTGGC
ACAGTTGGGTCATCAGTATATGCAGGATATGATTTACTACCCTTGT
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