CX671646

Overview
NameCX671646
Unique NameCX671646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.402e-46
Identity = 97/153 (63.40%), Postives = 109/153 (71.24%), Query Frame = 3
Query:  294 MGNCLQHSSARVDSTQSPXXXXXXXXXXXXXXXXXXXXXLPIPPSKEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            MGNCL  SSA+VDS+                                  + ESLPTP++EGEILSS NLKAFTFNELK ATRNFRPDSLLGEGGFG+V+KGWID  +L+ +KPGSG+VVAVKKLK EG+QGHKEWLTEVNYLGQL HPNLVKL
Sbjct:    1 MGNCLD-SSAKVDSSSHSPHANSASLSSRVSSKTSRSTVPSSLSINSYSSVESLPTPRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKL 152          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.233e-42
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 3
Query:  294 MGNCLQHSSARVD-STQSPXXXXXXXXXXXXXXXXXXXXXLPIPPSKEKGNSE--SLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            MGNCL  SSA+VD S  SP                       +  +    +S    LPT ++EGEILSS NLKAFTFNELK AT+NFR D+LLGEGGFG V+KGWIDQ SL+ ++PGSG+VVAVK+LKPEGFQGHKEWLTEVNYLGQL HPNLV L
Sbjct:    1 MGNCLD-SSAKVDNSNHSPHANSASSGSKVSSKTSRSTGPSGLSTTSYSTDSSFGPLPTLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLL 155          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.572e-40
Identity = 75/109 (68.81%), Postives = 92/109 (84.40%), Query Frame = 3
Query:  426 SKEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            S  K +S      K+EGEILSS+ +K+FTFNELK ATRNFRPDS++GEGGFG V+KGW+D+ +L+P KPG+G+V+AVKKL  EGFQGH+EWLTE+NYLGQL HPNLVKL
Sbjct:   28 SSRKSSSTVAAAQKTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKL 136          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.363e-38
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 3
Query:  462 PKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            P++EGEIL ++NLK F+ +ELK+ATRNFRPDS++GEGGFG V+KGWID+ SL+P+KPG+G+V+AVK+L  EGFQGH+EWL E+NYLGQL HPNLVKL
Sbjct:   41 PRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKL 137          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 3
Query:  435 KGNSESLPT-PKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            K +S S+ T P++EGEIL S NLK+FTF ELK ATRNFRPDS+LGEGGFG V+KGWID+ +L+ +KPG+G+V+AVKKL  +G+QGH+EWL EVNYLGQ  HPNLVKL
Sbjct:   32 KSSSVSIRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKL 138          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.476e-37
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = 3
Query:  441 NSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            +S S    K+EGEILSS+ +K+F+FNELK ATRNFR DS++GEGGFG V++GW+D+ +L+P K  SG+V+AVK+L P+GFQGH+EWLTE+NYLGQL HPNLVKL
Sbjct:   27 SSSSATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKL 130          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.253e-36
Identity = 71/107 (66.36%), Postives = 92/107 (85.98%), Query Frame = 3
Query:  435 KGNSESL-PTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            K +S S+ P+P++EGEIL S NLK+F+F ELK+ATRNFRPDS+LGEGGFG V+KGWID+ SL+ ++PG+G+V+AVKKL  +G+QGH+EWL EVNYLGQ  H +LVKL
Sbjct:   31 KASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKL 137          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.852e-28
Identity = 55/93 (59.14%), Postives = 74/93 (79.57%), Query Frame = 3
Query:  474 GEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            G++L S NLK + F +LKTAT+NF+PDS+LG+GGFG VY+GW+D  +L+P++ GSGM+VA+K+L  E  QG  EW +EVN+LG L H NLVKL
Sbjct:   63 GKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKL 155          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.242e-18
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3
Query:  450 SLPTPKSEGEILSS--SNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            SLP+P+S  ++ +    NL+ F++ EL  AT  F    ++GEGGFG VYKG I  +  S   P   +VVA+KKL  +G QGHK+WL EV +LG ++HPN+VKL
Sbjct:   53 SLPSPRSIKDLYTEREQNLRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPP---LVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKL 152          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 45/82 (54.88%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  507 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            F F EL  AT NF PD+ LGEGGFG VYKG +D          +G VVAVK+L   G QG++E+L EV  L  LHHPNLV L
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLD---------STGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 146          
The following BLAST results are available for this feature:
BLAST of CX671646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
APK2B_ARATH2.402e-4663.40Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH1.233e-4260.90Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
BIK1_ARATH2.572e-4068.81Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
NAK_ARATH5.363e-3871.13Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK1B_ARATH7.004e-3869.16Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y3545_ARATH3.476e-3766.35Probable receptor-like protein kinase At3g55450 OS... [more]
APK1A_ARATH2.253e-3666.36Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
CX32_ARATH3.852e-2859.14Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5707_ARATH1.242e-1847.57Probable receptor-like protein kinase At5g47070 OS... [more]
PBS1_ARATH4.418e-1654.88Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671646 ID=CX671646; Name=CX671646; organism=Citrus sinensis; type=EST; length=753bp
CAGGCTTCTGCTTCTTCCTCTTCGTTTCCTTAGCGCCGATTATTACTTTT
ATCTGCCTAATCTTATCTTATCATCATCGATTGGCCCACTCGACTAACCA
AACTGCACGTTGTGAAAAACCAACTTCAAAACCGAAGACACTTGAAAGCT
TCTTGTTAGTTTCCTCTTACTTAGAATCGTTTTAGTCGGTGCTACATTTA
TTTAAAAATTACAACCAGCTGAACGAACAAAAGAAAGAGTTTTTTTTTTT
GGTTTTTCAAAAAAGACAAAGCATATTTTAAGTACGAAGAAATATGGGAA
ACTGTTTACAGCATTCTTCAGCTAGAGTGGATTCCACCCAGAGCCCCCGC
GCTACTTCTGGAGCCTCAAGAATTTCCACTAGATCTAGTCATTCTTCTGC
CCCTTCCACCCTTCCCATTCCACCTTCAAAAGAAAAAGGCAATTCTGAAA
GTCTTCCAACTCCAAAGTCTGAGGGTGAAATATTGTCGTCCTCAAATTTG
AAAGCCTTCACATTCAATGAGCTCAAGACTGCCACCAGAAACTTCCGTCC
TGACAGTCTTCTCGGCGAAGGTGGATTTGGTTTTGTTTACAAAGGATGGA
TTGATCAACACTCACTTTCACCTGCTAAGCCTGGATCAGGAATGGTCGTT
GCTGTCAAGAAGCTTAAGCCTGAAGGTTTCCAAGGACACAAGGAGTGGTT
GACAGAAGTTAATTATCTTGGCCAGCTTCATCATCCAAATCTGGTTAAGC
TAA
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