CX671641

Overview
NameCX671641
Unique NameCX671641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671641_ssr112 microsatellite CX671641_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5079 contig Csv1_Contig5079:1..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 2.912e-102
Identity = 173/209 (82.78%), Postives = 185/209 (88.52%), Query Frame = -3
Query:  229 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLS 855
            HQAVALRVG DHAVVYRCN+IGYQD LYVHSNRQF+REC+IYGTVDFIFGNAAV+LQ C IYARKPMA QK TITAQNRKDPNQNTGISIH C L A PDL+ASKGS PTYLGRPWKLYSRVVYM++ MGDHI PRGWLEWNG FALD+LYYGEYMN G GS +G RV+WPGY VITS  EASKFTV+QFI GSSWLPSTGV+F  GLS
Sbjct:  378 HQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGLS 586          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 1.036e-99
Identity = 166/210 (79.05%), Postives = 186/210 (88.57%), Query Frame = -3
Query:  226 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLSV 855
            HQAVALR+GADHAV+YRCN+IGYQDTLYVHSNRQF+RECDIYGTVDFIFGNAAVVLQ C+IYARKPM  QKNTITAQNRKDPNQNTGISIH   + AA DLQA+ GS  TYLGRPWKL+SR VYM++Y+G H+  RGWLEWN  FALDTLYYGEY+NSGPGS +G RV WPGYRVI S  EA++FTV++FIYGSSWLPSTGV+FL GLS+
Sbjct:  389 HQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGLSI 598          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.455e-77
Identity = 135/208 (64.90%), Postives = 164/208 (78.85%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALR G+D +V YRC+  GYQDTLYVHS RQFYRECDIYGTVDFIFGNAAVVLQ C I+ARKP   + NT+TAQ R DPNQ+TGI IH+C + AA DL+  + S+ T+LGRPWK YSR VY+ T++   I P GW+EW+GDFAL+TLYY EYMN+GPGS+  +RV+W GY V+TS ++ S+FTV  FI G+SWLP+T V F  GL
Sbjct:  304 HQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.381e-74
Identity = 133/208 (63.94%), Postives = 152/208 (73.08%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALR  A+ +  YRC+  GYQDTLYVHS RQFYRECDIYGTVDFIFGNAA + Q C IYARKPMA QKN ITA  R DPNQNTGISI +C++ AAPDL A   S  T+LGRPWK YSR V+M +Y+ D +QP GWLEWNG   LDT+YYGEY N GPG+    RV+W GY ++  A EA  FTV  F  G +WLP T + F GGL
Sbjct:  409 HQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLA-EAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.474e-74
Identity = 130/211 (61.61%), Postives = 161/211 (76.30%), Query Frame = -3
Query:  226 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQA-SKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLSV 855
            HQAVALR  +D +V YRCN+ GYQDTLY H+ RQFYR+C I GTVDFIFG+A VV Q C I A+K +  QKN+ITAQ RKDPN+ TGISI  C++ A  DL+A S  S PTYLGRPWKLYSR V M +++ + I+P GWLEWNGDFAL++L+YGEYMN GPG+ +G RV+WPGY+V   +T+A  +TV+QFI G+ WLPSTGV +     V
Sbjct:  312 HQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYTAEFGV 522          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 1.079e-72
Identity = 128/208 (61.54%), Postives = 151/208 (72.60%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALRVGAD +V+ RC +  YQDTLY HS RQFYR+  + GT+DFIFGNAAVV QKC + ARKP   Q+N +TAQ R DPNQ TG SI  C + A+PDL+      PTYLGRPWK YSR V M +Y+G  I P GW EW+GDFAL TLYYGE+MN+GPG+    RV+WPGY VIT   EA  FTV++ I G SWL ST VA++ GL
Sbjct:  341 HQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.404e-72
Identity = 130/202 (64.36%), Postives = 147/202 (72.77%), Query Frame = -3
Query:  250 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGV 855
            HQAVALR GAD +  Y+C+ +GYQDTLYVHS RQFY ECD+YGT+DFIFGNAA VLQKC +YARKP   QKN  TAQ R DPNQNTGISI +C + AA DL     S  TYLGRPWK YSR V++L+ M   I P GWLEW+GDFAL TLYY EY N+GPGS    RV WPGY V T+ TE  +FTV  FI GS WL S  +
Sbjct:  113 HQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNI 314          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.140e-72
Identity = 127/208 (61.06%), Postives = 154/208 (74.04%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVA+R   D  V YRC + GYQDTLY HS RQF+REC I GTVDFIFG+A  V Q C I A++ +  QKN+ITAQ RKDPN+ TG +I   ++ A  DL  +  +  TYLGRPWKLYSR V+M  YM D I P GWLEWNG+FALDTLYYGEYMNSGPG+++  RV+WPGY V+ ++ EA+ FTVSQ I G+ WLPSTG+ F+ GL
Sbjct:  318 HQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.101e-72
Identity = 127/208 (61.06%), Postives = 151/208 (72.60%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALRVGAD +V+ RC +  YQDTLY HS RQFYR+  + GT+DFIFGNAAVV QKC + ARKP   Q+N +TAQ R DPNQ TG SI  C++ A+ DL+      PTYLGRPWK YSR V M +Y+G  I P GW EW+GDFAL TLYYGE+MN+GPG+    RV+WPGY  IT   EA  FTV++ I G SWL STGVA++ GL
Sbjct:  341 HQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.356e-72
Identity = 128/207 (61.84%), Postives = 148/207 (71.50%), Query Frame = -3
Query:  232 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 852
            QAVALRVGAD +V+ RC +  YQDTLY HS RQFYR+  + GTVDFIFGNAAVV QKC I ARKP   QKN +TAQ R DPNQ TG SI  C + A+PDL+       TYLGRPWK +SR V M +Y+  HI P GW EW GDFAL TLYYGE+MN+GPG+    RV+WPGY VIT   EA  FTV++ I G SWL ST VA++ GL
Sbjct:  336 QAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
The following BLAST results are available for this feature:
BLAST of CX671641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME61_ARATH2.912e-10282.78Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME34_ARATH1.036e-9979.05Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME2_CITSI1.455e-7764.90Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME25_ARATH4.381e-7463.94Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PRUPE7.474e-7461.61Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME21_SOLLC1.079e-7261.54Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME_ACTDE2.404e-7264.36Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME32_ARATH3.140e-7261.06Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME22_SOLLC4.101e-7261.06Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME3_SOLLC5.356e-7261.84Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C08-F16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671641 ID=CX671641; Name=CX671641; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTAAAGACCGTCACAAATATTATTACTTATTACAACATCAAGACG
AAAAAAATGAAACCAGAAAATTATACAATTGCGAAAGAAATATTTAGAAT
TTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGTAAAATTCCATTTGA
TCCTTCCAACACTCATGAGACCCACCTATATATAATAAGTATACGTACTA
AAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCCCACCCAAGAAAGCC
ACCCCAGTCGACGGCAGCCACGACGACCCGTAGATAAACTGCGACACAGT
GAATTTACTTGCCTCCGTCGCCGACGTTATAACCCGGTAACCCGGCCACC
TCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGTTCATGTACTCGCCG
TAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCATTCAAGCCAGCCTCT
GGGTTGGATGTGGTCACCCATGTACGTTAACATGTACACAACCCTCGAGT
AGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGCTGCCTTTCGAGGCC
TGAAGATCGGGGGCGGCGTAGAGGCTGCAGTCGTGGATTGAGATGCCCGT
GTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGATGGTGTTCTTCTGCA
TGGCCATCGGCTTGCGAGCGTAGATGGCGCACTTCTGTAAGACCACGGCG
GCGTTCCCGAAGATGAAGTCCACGGTGCCGTAGATGTCGCACTCGCGGTA
GAACTGCCGGTTTGAGTGCACGTAGAGGGTGTCTTGGTAACCGATTACGT
TGCAGCGGTACACCACCGCGTGGTCGGCGCCGACCCGGAGGGCCACCGCT
TGGTGCT
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