CX671635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 8.376e-102 Identity = 142/164 (86.59%), Postives = 147/164 (89.63%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVRKW GK LVNSKE P+FEQP+MT++KLL YG M+VQEQENVK Sbjct: 245 VNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVK 408 HSP 2 Score: 104.76 bits (260), Expect = 8.376e-102 Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = -2 Query: 169 RVQLADKYLSEAALGEANEDAIQSGNFYG-KAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 360 RVQLADKY+SEAALG+AN DAI+ G FYG +AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 409 RVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 280.796 bits (717), Expect = 1.562e-100 Identity = 135/164 (82.32%), Postives = 147/164 (89.63%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVRKW GK LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVK Sbjct: 236 VNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVK 399 HSP 2 Score: 107.842 bits (268), Expect = 1.562e-100 Identity = 50/66 (75.76%), Postives = 60/66 (90.91%), Query Frame = -2 Query: 166 RVQLADKYLSEAALGEANEDAIQSGNFYGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 360 RVQLA++YLSEAALG+AN DA+++G+FYG+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 400 RVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.443e-98 Identity = 132/164 (80.49%), Postives = 146/164 (89.02%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVRKW GK LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVK Sbjct: 235 VNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVK 398 HSP 2 Score: 106.301 bits (264), Expect = 2.443e-98 Identity = 47/65 (72.31%), Postives = 58/65 (89.23%), Query Frame = -2 Query: 166 RVQLADKYLSEAALGEANEDAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 360 RVQLAD Y+S+AALG+AN+DA+++G+FYGK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 399 RVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 271.166 bits (692), Expect = 3.187e-98 Identity = 134/164 (81.71%), Postives = 140/164 (85.37%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVRK+ GK LVNS+E P FEQP MT EKL+EYGNM+V EQENVK Sbjct: 245 VNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVK 408 HSP 2 Score: 109.768 bits (273), Expect = 3.187e-98 Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = -2 Query: 169 RVQLADKYLSEAALGEANEDAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 360 RVQLA+ YLS+AALG+AN DAI G FYGK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 409 RVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 4.983e-96 Identity = 130/164 (79.27%), Postives = 140/164 (85.37%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+ D V + +VKLVD FPGQSIDFFGALRARVY DEVRKW GK LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVK Sbjct: 243 VNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVK 406 HSP 2 Score: 105.916 bits (263), Expect = 4.983e-96 Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = -2 Query: 163 RVQLADKYLSEAALGEANEDAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 360 RVQLAD+Y+S AALG+AN+DAI G F+GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 407 RVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 1.120e-86 Identity = 144/164 (87.80%), Postives = 149/164 (90.85%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVRKW GK LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVK Sbjct: 245 VNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVK 408 HSP 2 Score: 50.8322 bits (120), Expect = 1.120e-86 Identity = 23/29 (79.31%), Postives = 26/29 (89.66%), Query Frame = -2 Query: 274 RVQLADKYLSEAALGEANEDAIQSGNFYG 360 RVQLADKYLSEAALG+AN DA+ +G FYG Sbjct: 409 RVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 1.747e-84 Identity = 136/164 (82.93%), Postives = 146/164 (89.02%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVRKW K LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVK Sbjct: 232 VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVK 395 HSP 2 Score: 53.1434 bits (126), Expect = 1.747e-84 Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = -2 Query: 271 RVQLADKYLSEAALGEANEDAIQSGNFYGK 360 RVQLADKYLSEAALG+AN+DA+++G FYGK Sbjct: 396 RVQLADKYLSEAALGQANDDAMKTGAFYGK 425
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 6.596e-84 Identity = 139/164 (84.76%), Postives = 148/164 (90.24%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVRKW GK LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVK Sbjct: 245 VNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVK 408 HSP 2 Score: 46.595 bits (109), Expect = 6.596e-84 Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = -2 Query: 280 RVQLADKYLSEAALGEANEDAIQSGNF 360 RVQLADKY+SEAALG+AN+DAI+ G F Sbjct: 409 RVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 280.411 bits (716), Expect = 4.238e-83 Identity = 135/164 (82.32%), Postives = 146/164 (89.02%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVRKW GK LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVK Sbjct: 247 VNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVK 410 HSP 2 Score: 50.0618 bits (118), Expect = 4.238e-83 Identity = 23/28 (82.14%), Postives = 27/28 (96.43%), Query Frame = -2 Query: 277 RVQLADKYLSEAALGEANEDAIQSGNFY 360 RVQLADKYL+EAALG ANEDAI+SG+F+ Sbjct: 411 RVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of CX671635 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 276.944 bits (707), Expect = 6.042e-82 Identity = 133/164 (81.10%), Postives = 145/164 (88.41%), Query Frame = -1 Query: 359 VNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXGKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVK 850 VNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V ++ +V+LVDTFPGQSIDFFGALRARVYDDEVR+W + LVNSKE PTFEQP++T+EKLLEYG+M+V EQENVK Sbjct: 241 VNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVK 404 HSP 2 Score: 49.6766 bits (117), Expect = 6.042e-82 Identity = 22/28 (78.57%), Postives = 28/28 (100.00%), Query Frame = -2 Query: 277 RVQLADKYLSEAALGEANEDAIQSGNFY 360 RVQLADKYL+EAALGEANEDA+++G+F+ Sbjct: 405 RVQLADKYLNEAALGEANEDAMKTGSFF 432 The following BLAST results are available for this feature:
BLAST of CX671635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671635 ID=CX671635; Name=CX671635; organism=Citrus sinensis; type=EST; length=850bpback to top |