CX671622

Overview
NameCX671622
Unique NameCX671622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig830 contig Csv1_Contig830:62..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY11_SOLTU (Cytochrome c1-1, heme protein, mitochondrial OS=Solanum tuberosum GN=CYCL PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.367e-88
Identity = 156/172 (90.70%), Postives = 162/172 (94.19%), Query Frame = 3
Query:  204 GSVGMKSLRAFALLGAGVSGFLSFATIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            GS G KS RA A +GAGVSG LSFATIA +DEAEHGL CP+YPWPH+GILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPY+NE AARFANGGAYPPDLSLITKARH+GQNYVFALLT YRDPPAG
Sbjct:   48 GSAGSKSFRALAAIGAGVSGLLSFATIAYSDEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAG 219          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY12_SOLTU (Cytochrome c1-2, heme protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=CYCL PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.258e-83
Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 3
Query:  243 LGAGVSGFLSFATIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            +GAGVSG L FAT+ASADEAEHGL CPSYPWPH GILSSYDHASIRRGHQVYQQVCASCHSMSL+SYRDLVGVAYTEEE KAMAAEIEV DGPNDEGEMFTRPGKLSDRFPQPY NE AARFANGGAYPPDLSLITKARH+GQNYVFALLT YRDPPAG
Sbjct:    1 IGAGVSGLLGFATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLVSYRDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYPNEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAG 159          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_MOUSE (Cytochrome c1, heme protein, mitochondrial OS=Mus musculus GN=Cyc1 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.398e-55
Identity = 103/165 (62.42%), Postives = 126/165 (76.36%), Query Frame = 3
Query:  225 LRAFALLGAGVSGFLSFATIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            L A  +L AG +G L+ A  ++   ++  L  PSYPW H+G+LSS DH SIRRG QVY+QVC+SCHSM  ++YR LVGV YTEEE KA+A E+EV DGPND+GEMF RPGKLSD FP+PY N +AAR AN GA PPDLS I +ARH G++YVF+LLTGY +PP G
Sbjct:   61 LSALGMLAAGGAG-LAVALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTG 224          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_BOVIN (Cytochrome c1, heme protein, mitochondrial OS=Bos taurus GN=CYC1 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.202e-54
Identity = 101/165 (61.21%), Postives = 126/165 (76.36%), Query Frame = 3
Query:  225 LRAFALLGAGVSGFLSFATIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            L A  +L AG +G L+ A  ++   ++  L  PSYPW H+G+LSS DH SIRRG QVY+QVC+SCHSM  ++YR LVGV YTE+E KA+A E+EV DGPN++GEMF RPGKLSD FP+PY N +AAR AN GA PPDLS I +ARH G++YVF+LLTGY +PP G
Sbjct:   61 LSALGMLAAGGAG-LAVALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEDEAKALAEEVEVQDGPNEDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTG 224          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_HUMAN (Cytochrome c1, heme protein, mitochondrial OS=Homo sapiens GN=CYC1 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54
Identity = 101/165 (61.21%), Postives = 125/165 (75.76%), Query Frame = 3
Query:  225 LRAFALLGAGVSGFLSFATIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            L A  +L AG +G L+ A  ++   ++  L  PSYPW H+G+LSS DH SIRRG QVY+QVCASCHSM  ++YR LVGV YTE+E K +AAE+EV DGPN++GEMF RPGKL D FP+PY N +AAR AN GA PPDLS I +ARH G++YVF+LLTGY +PP G
Sbjct:   61 LSALGMLAAGGAG-LAVALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTG 224          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_KLULA (Cytochrome c1, heme protein, mitochondrial OS=Kluyveromyces lactis GN=CYT1 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.207e-46
Identity = 98/188 (52.13%), Postives = 125/188 (66.49%), Query Frame = 3
Query:  168 SFFTSKKIHEDAGSVGMKSLRAFALLGAGVSGFLSFATIASADE---AEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGY-RDPPAG 719
            SF T+ K       V    +   A++G G S  L +A   +AD    AEHGL  P Y W H G L ++DH+SIRRG+QVY++VCA+CHS+  +++R +VGV++T  E +AMA E E  D P+D+G    RPGKL+D  P PY NEQAAR AN GA PPDLSLI KARH G +Y+FALLTGY  +PPAG
Sbjct:    4 SFSTAAKQAVKGTYVQRAIVGGAAVVGIGASTML-YADSLTADAMTAAEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSHTNAEVRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSLIVKARHGGPDYIFALLTGYPEEPPAG 190          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_DICDI (Cytochrome c1, heme protein, mitochondrial OS=Dictyostelium discoideum GN=cyc1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.765e-46
Identity = 89/157 (56.69%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  249 AGVSGFLSFATIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            +GV G  +  T ++   ++  +   SYPW H+    SYDHA+IRRGHQVY QVC++CHS++LISYR L  VAYT EE KAMAA+  V+DGP+ EG+MF R G+++D  P+PY N  AARFAN GA PPDLSL+ KAR   ++YVF+LLTGY +PPAG
Sbjct:   20 SGVVGTATAITTSTTLLSDDFVQPTSYPWEHRFPWQSYDHAAIRRGHQVYTQVCSTCHSLNLISYRHLANVAYTPEELKAMAADTTVMDGPDSEGDMFERKGQVTDFHPKPYPNSNAARFANNGALPPDLSLVIKARGAHEDYVFSLLTGYCEPPAG 176          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_YEAST (Cytochrome c1, heme protein, mitochondrial OS=Saccharomyces cerevisiae GN=CTC1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.869e-45
Identity = 98/191 (51.31%), Postives = 126/191 (65.97%), Query Frame = 3
Query:  180 SKKIHEDAGSVGMKSLRAFA-LLGAGVSGF-LSFATIASADE--------AEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRD-PPAG 719
            SK  +  A     KS +    L+ AGV+   ++ +T+  AD         AEHGL  P+Y W H G   ++DHASIRRG+QVY++VCA+CHS+  +++R LVGV++T EE + MA E E  D P+++G    RPGKLSD  P PY NEQAAR AN GA PPDLSLI KARH G +Y+F+LLTGY D PPAG
Sbjct:   15 SKSFYSTATGAASKSGKLTQKLVTAGVAAAGITASTLLYADSLTAEAMTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAG 205          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_SCHPO (Cytochrome c1, heme protein, mitochondrial OS=Schizosaccharomyces pombe GN=cyt1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.441e-45
Identity = 80/147 (54.42%), Postives = 110/147 (74.83%), Query Frame = 3
Query:  279 TIASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG 719
            ++++    E GL    + WP   +LS +DHAS+RRG QVY++VC++CHS++LI++R LVGV +T +E K MA+E+E  DGP+DEG MF RPGKLSD  P PY N +AAR +N GA PPDLS + + RH GQ+Y+++LLTGY +PPAG
Sbjct:   59 SLSAGTPKEEGLHFIQHDWPQSKVLSGFDHASLRRGFQVYREVCSACHSLNLIAWRHLVGVTHTADEAKQMASEVEYEDGPDDEGNMFKRPGKLSDFLPPPYPNVEAARASNNGAAPPDLSCVVRGRHGGQDYIYSLLTGYTEPPAG 205          
BLAST of CX671622 vs. ExPASy Swiss-Prot
Match: CY1_NEUCR (Cytochrome c1, heme protein, mitochondrial OS=Neurospora crassa GN=cyt-1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.524e-44
Identity = 90/165 (54.55%), Postives = 112/165 (67.88%), Query Frame = 3
Query:  231 AFALLGAGVSGFLSFATIASA-DEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHDGQNYVFALLTGYRD-PPAG 719
            A A+    ++ +      ASA   AE GL    YPW H+  L ++DH ++RRG QVY++VCASCHS+S + YR LVG   T +E KA+A E E    PND+GE+  RPGKLSD  P PY N++AARFAN GA PPDLSLI KARH G +Y+F+LLTGY D PPAG
Sbjct:   50 ATAVAAGSIAWYYHLYGFASAMTPAEEGLHATKYPWVHEQWLKTFDHQALRRGFQVYREVCASCHSLSRVPYRALVGTILTVDEAKALAEENEYDTEPNDQGEIEKRPGKLSDYLPDPYKNDEAARFANNGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAG 214          
The following BLAST results are available for this feature:
BLAST of CX671622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CY11_SOLTU1.367e-8890.70Cytochrome c1-1, heme protein, mitochondrial OS=So... [more]
CY12_SOLTU2.258e-8391.82Cytochrome c1-2, heme protein, mitochondrial (Frag... [more]
CY1_MOUSE3.398e-5562.42Cytochrome c1, heme protein, mitochondrial OS=Mus ... [more]
CY1_BOVIN2.202e-5461.21Cytochrome c1, heme protein, mitochondrial OS=Bos ... [more]
CY1_HUMAN2.876e-5461.21Cytochrome c1, heme protein, mitochondrial OS=Homo... [more]
CY1_KLULA2.207e-4652.13Cytochrome c1, heme protein, mitochondrial OS=Kluy... [more]
CY1_DICDI3.765e-4656.69Cytochrome c1, heme protein, mitochondrial OS=Dict... [more]
CY1_YEAST1.869e-4551.31Cytochrome c1, heme protein, mitochondrial OS=Sacc... [more]
CY1_SCHPO2.441e-4554.42Cytochrome c1, heme protein, mitochondrial OS=Schi... [more]
CY1_NEUCR3.524e-4454.55Cytochrome c1, heme protein, mitochondrial OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B10-D20-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671622 ID=CX671622; Name=CX671622; organism=Citrus sinensis; type=EST; length=720bp
AGTGCGCCCTCATCGTTGACCACAGGCTCTCCGGTCGAGCAGCTTTGCTC
ATCTCATCATCTCTGAACTAATTGATAGAGATATTAGCTGAAATGGTTGG
AGGAGGAGTTATCCACCAGCTCCTGAGAAAGAGACTTCAGTCTCAGTCCA
CTGGCTTACCAGTGTTATCCTTTTTTACGTCAAAGAAAATTCATGAAGAT
GCTGGATCTGTTGGTATGAAGTCCCTAAGGGCATTTGCGCTCCTTGGAGC
CGGTGTTTCAGGGTTTTTAAGTTTCGCAACAATAGCTTCTGCTGATGAAG
CTGAACATGGGTTGGCATGTCCCAGTTATCCTTGGCCTCACAAAGGCATT
CTCAGTTCTTACGACCATGCCTCGATTCGCCGTGGTCACCAGGTCTACCA
GCAAGTCTGTGCATCCTGCCATTCTATGTCACTAATATCATACCGTGATT
TGGTGGGTGTCGCATATACTGAAGAGGAGACAAAGGCAATGGCTGCTGAG
ATTGAGGTCGTTGATGGACCTAACGATGAGGGTGAGATGTTCACCCGTCC
AGGTAAACTCAGCGATCGTTTTCCTCAGCCATATTCCAATGAACAGGCAG
CAAGGTTTGCTAATGGAGGGGCATATCCTCCAGATTTAAGTCTTATTACC
AAAGCTCGTCATGATGGTCAGAATTATGTGTTTGCTCTTCTAACTGGTTA
TCGTGATCCTCCTGCTGGTG
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