CX671621

Overview
NameCX671621
Unique NameCX671621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11033 contig Csv1_Contig11033:274..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY11_SOLTU (Cytochrome c1-1, heme protein, mitochondrial OS=Solanum tuberosum GN=CYCL PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.429e-70
Identity = 129/136 (94.85%), Postives = 132/136 (97.06%), Query Frame = -3
Query:  353 GGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLDVVN 760
            GGAYPPDLSLITKARH+GQNYVFALLT YRDPPAGVSIREGLHYNPYFPGGAIAMPKML DGA+EYEDG PATEAQMGKDVV+FLSWAAEPEMEERKLMGFKWIFVLSLALLQA YYRRLRWSVLKSRKLVLDVVN
Sbjct:  185 GGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGIPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 320          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY12_SOLTU (Cytochrome c1-2, heme protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=CYCL PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.438e-70
Identity = 128/136 (94.12%), Postives = 132/136 (97.06%), Query Frame = -3
Query:  353 GGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLDVVN 760
            GGAYPPDLSLITKARH+GQNYVFALLT YRDPPAGVSIREGLHYNPYFPGGAIAMPKML DGA+EYEDG PATEAQMGKDVV+FL+WAAEPEMEERKLMGFKWIFVLSLALLQA YYRRLRWSVLKSRKLVLDVVN
Sbjct:  125 GGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGVPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 260          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_NEUCR (Cytochrome c1, heme protein, mitochondrial OS=Neurospora crassa GN=cyt-1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.035e-41
Identity = 80/133 (60.15%), Postives = 102/133 (76.69%), Query Frame = -3
Query:  362 GAYPPDLSLITKARHDGQNYVFALLTGYRD-PPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLD 757
            GA PPDLSLI KARH G +Y+F+LLTGY D PPAG S+  GL++NPYFPG  IAM ++L DG ++YEDGTPA+ +QM KDVV FL+WAAEPEM++RK MG K + V S+    + Y +R +W+ LKSRK+V D
Sbjct:  180 GALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGASVGAGLNFNPYFPGTGIAMARVLYDGLVDYEDGTPASTSQMAKDVVEFLNWAAEPEMDDRKRMGMKVLVVTSVLFALSVYVKRYKWAWLKSRKIVYD 312          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_YEAST (Cytochrome c1, heme protein, mitochondrial OS=Saccharomyces cerevisiae GN=CTC1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 76/133 (57.14%), Postives = 101/133 (75.94%), Query Frame = -3
Query:  362 GAYPPDLSLITKARHDGQNYVFALLTGYRD-PPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLD 757
            GA PPDLSLI KARH G +Y+F+LLTGY D PPAGV++  G +YNPYFPGG+IAM ++L D  +EYEDGTPAT +QM KDV TFL+W AEPE +ERK +G K + +LS   L + + ++ +W+ +K+RK V +
Sbjct:  171 GALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFN 303          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_KLULA (Cytochrome c1, heme protein, mitochondrial OS=Kluyveromyces lactis GN=CYT1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 77/133 (57.89%), Postives = 100/133 (75.19%), Query Frame = -3
Query:  362 GAYPPDLSLITKARHDGQNYVFALLTGY-RDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLD 757
            GA PPDLSLI KARH G +Y+FALLTGY  +PPAGV +  G +YNPYFPGG+IAM ++L D  +EYEDGTPAT +QM KDV TFL W +EPE +ERK +G K + VLS   L + + ++ +W+ +KSRK+V +
Sbjct:  156 GALPPDLSLIVKARHGGPDYIFALLTGYPEEPPAGVVLPPGANYNPYFPGGSIAMGRVLFDDLVEYEDGTPATTSQMAKDVTTFLHWCSEPEHDERKRLGLKAMIVLSSLYLLSVWVKKFKWASIKSRKIVFN 288          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_MOUSE (Cytochrome c1, heme protein, mitochondrial OS=Mus musculus GN=Cyc1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.442e-38
Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = -3
Query:  371 GAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 757
            GA PPDLS I +ARH G++YVF+LLTGY +PP GVS+REGL++NPYFPG AI M   +    LEY+DGTPAT +Q+ KDV TFL WA+EPE + RK MG K + ++ L L      +R +WSVLKSRKL
Sbjct:  191 GALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYTEVLEYDDGTPATMSQVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKL 319          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_BOVIN (Cytochrome c1, heme protein, mitochondrial OS=Bos taurus GN=CYC1 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.442e-38
Identity = 76/129 (58.91%), Postives = 96/129 (74.42%), Query Frame = -3
Query:  371 GAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 757
            GA PPDLS I +ARH G++YVF+LLTGY +PP GVS+REGL++NPYFPG AI M   + +  LE++DGTPAT +Q+ KDV TFL WAAEPE + RK MG K + ++ L L      +R +WSVLKSRKL
Sbjct:  191 GALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYNEVLEFDDGTPATMSQVAKDVCTFLRWAAEPEHDHRKRMGLKMLLMMGLLLPLVYAMKRHKWSVLKSRKL 319          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_HUMAN (Cytochrome c1, heme protein, mitochondrial OS=Homo sapiens GN=CYC1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.460e-38
Identity = 75/129 (58.14%), Postives = 97/129 (75.19%), Query Frame = -3
Query:  371 GAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 757
            GA PPDLS I +ARH G++YVF+LLTGY +PP GVS+REGL++NPYFPG AIAM   +    LE++DGTPAT +Q+ KDV TFL WA+EPE + RK MG K + +++L +      +R +WSVLKSRKL
Sbjct:  191 GALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKL 319          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_SCHPO (Cytochrome c1, heme protein, mitochondrial OS=Schizosaccharomyces pombe GN=cyt1 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 69/129 (53.49%), Postives = 99/129 (76.74%), Query Frame = -3
Query:  371 GAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 757
            GA PPDLS + + RH GQ+Y+++LLTGY +PPAGV + +G+++NP+FPG  IAM + L D A+E+EDGTPAT AQ  KDVV FL WA+EPE++ RK MGF+ I VL++    + +Y+R +W+ +K+RK+
Sbjct:  172 GAAPPDLSCVVRGRHGGQDYIYSLLTGYTEPPAGVEVPDGMNFNPFFPGTQIAMARPLFDDAVEFEDGTPATTAQAAKDVVNFLHWASEPELDIRKKMGFQVITVLTILTALSMWYKRFKWTPIKNRKI 300          
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_DICDI (Cytochrome c1, heme protein, mitochondrial OS=Dictyostelium discoideum GN=cyc1 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.343e-35
Identity = 70/129 (54.26%), Postives = 95/129 (73.64%), Query Frame = -3
Query:  371 GAYPPDLSLITKARHDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKL 757
            GA PPDLSL+ KAR   ++YVF+LLTGY +PPAGV +  G ++NPYFPG  IAM   L DG +EY+DGT  + +QM KDV TFL WA+EPE ++RK +G K +  +S+  L   Y++RL+WSV+K+RK+
Sbjct:  143 GALPPDLSLVIKARGAHEDYVFSLLTGYCEPPAGVRVVGGQYFNPYFPGTKIAMAPPLADGMVEYDDGTDNSMSQMAKDVSTFLCWASEPEHDDRKKLGMKVLLGVSIIALPLFYWKRLKWSVIKTRKI 271          
The following BLAST results are available for this feature:
BLAST of CX671621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CY11_SOLTU1.429e-7094.85Cytochrome c1-1, heme protein, mitochondrial OS=So... [more]
CY12_SOLTU2.438e-7094.12Cytochrome c1-2, heme protein, mitochondrial (Frag... [more]
CY1_NEUCR9.035e-4160.15Cytochrome c1, heme protein, mitochondrial OS=Neur... [more]
CY1_YEAST2.225e-3957.14Cytochrome c1, heme protein, mitochondrial OS=Sacc... [more]
CY1_KLULA2.225e-3957.89Cytochrome c1, heme protein, mitochondrial OS=Kluy... [more]
CY1_MOUSE1.442e-3858.91Cytochrome c1, heme protein, mitochondrial OS=Mus ... [more]
CY1_BOVIN1.442e-3858.91Cytochrome c1, heme protein, mitochondrial OS=Bos ... [more]
CY1_HUMAN2.460e-3858.14Cytochrome c1, heme protein, mitochondrial OS=Homo... [more]
CY1_SCHPO5.481e-3853.49Cytochrome c1, heme protein, mitochondrial OS=Schi... [more]
CY1_DICDI4.343e-3554.26Cytochrome c1, heme protein, mitochondrial OS=Dict... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B10-D20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671621 ID=CX671621; Name=CX671621; organism=Citrus sinensis; type=EST; length=762bp
TTTTTTGATCAAAAACTGTTTCTATCGATCGGCCAACCACCCTGAATAAG
GTCAAAGGACTTTTATCCGATGTAAAGTACATTGACCAATGACCATTGTT
TCCTTCTGTTTCAAGGATTGCATTTACAAATCCCACTAATAACAAATTAT
GAGAAGTGATAATTCAGCAAGGAAAATATGGCACCCAAAAAGAAATCTCT
AACAAAAAATAATGTATCGGGTATATGGAGTAGCTTATTTCTTCACAACT
TGGGGAAAAAAAGATTCTTCAGGTCACTCCATTTCCAAAAAAGAAGTAGA
AACCTAGACCATCTGATCAAGCAATTATTTCTGATTTCCAGAAGGGAAGC
TAGTTGACGACATCAAGGACCAGCTTGCGGGACTTAAGAACTGACCACCT
CAGGCGCCGGTAGTAACCAGCTTGAAGTAAAGCCAATGACAGTACGAATA
TCCATTTAAAACCCATCAGCTTCCTCTCTTCCATTTCCGGTTCTGCAGCC
CACGATAAAAATGTCACAACATCTTTTCCCATCTGAGCTTCTGTTGCAGG
GGTACCATCTTCATACTCTAAAGCACCATCAATAAGCATTTTAGGCATAG
CAATTGCTCCGCCAGGAAAGTAAGGATTATAGTGCAATCCCTCTCTGATC
GAAACACCAGCAGGAGGATCACGATAACCAGTTAGAAGAGCAAACACATA
ATTCTGACCATCATGACGAGCTTTGGTAATAAGACTTAAATCTGGAGGAT
ATGCCCCTCCAT
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