CX671617

Overview
NameCX671617
Unique NameCX671617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12151 contig Csv1_Contig12151:97..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42
Identity = 87/240 (36.25%), Postives = 131/240 (54.58%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLC--LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W  G+PL +EE++V PP++ EVRVK+LY ++CHTD+   E     P++PR                       D V+P + GECK+C++C S  SN+C  L+  +    ++ DG SR +++G+ ++H    ST+SEY VI    + +++P   L     LSCGF+TG+GA    AK +K                    R+ GA++IIG+D NP K E+ + FG TDF+N
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVN 245          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42
Identity = 87/240 (36.25%), Postives = 131/240 (54.58%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLC--LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W  G+PL +EE++V PP++ EVRVK+LY ++CHTD+   E     P++PR                       D V+P + GECK+C++C S  SN+C  L+  +    ++ DG SR +++G+ ++H    ST+SEY VI    + +++P   L     LSCGF+TG+GA    AK +K                    R+ GA++IIG+D NP K E+ + FG TDF+N
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVN 245          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.606e-42
Identity = 89/240 (37.08%), Postives = 127/240 (52.92%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLC--LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W  G+PL +EE++V PP++ EVRVK+LY ++CHTD+   E     P++PR                       D V+P + GECKDC +C S  SNLC  L+  +    ++ DG SR ++ G+ ++H    ST+SEY VI    + +++P   L     LSCG +TG GA    AK +K                    RM GA++IIG+D NP K E+ + FG TDF+N
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVN 245          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.270e-41
Identity = 96/253 (37.94%), Postives = 135/253 (53.36%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPI-ALNGLML-DGTSRMSV---------RGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  + ITCKA V WG   PL ++EI V+PP+  EVRVK+LY+S+CHTD+ C  G       +PR                       D VIPT+ GEC +C+ C    SNLC +Y +  +  +M+ DG +R S          + Q +YH  + ST++EY V+D+  VV++DP+  L   S LSCG +TG GAAW  A V++                    R +GA++IIG+D N  K EKG+  G+TDFIN
Sbjct:    4 TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFEKGKLMGVTDFIN 256          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.515e-41
Identity = 91/246 (36.99%), Postives = 134/246 (54.47%), Query Frame = 1
Query:   64 MSNS--QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            MSN+  Q I C+A V W  G+PL +EE++V PP++ EVR+K+L+ S+CHTD+   E     PL+PR                       D V+P + GECKDC +C S  SN+C    I  + G+ML DG SR S++G+ +YH    ST+SEY V+    + +++PS  L     LSCG +TG GA    AK +K                    R+ GA++IIG+D +  + E+ + FG+T+F+N
Sbjct:    1 MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVN 246          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.243e-40
Identity = 89/240 (37.08%), Postives = 128/240 (53.33%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPI-ALNGLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W  G+PL +EE++V PP++ EVRVK+LY S+CHTD+   E     P++PR                       D V+P + GECK+C +C S  SN+C    I  + G+M+ DG SR S+ G+ +YH    ST+SEY V+    V +++P   L     LSCG +TG GA+   AK  K                    R+ GA++IIG+D NP + E+ + FG T+F+N
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVN 245          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 93/245 (37.96%), Postives = 124/245 (50.61%), Query Frame = 1
Query:   58 LTMSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            ++ +  Q I CKA V W    PL +E IQV PPK+ EVRVK+LY +VCHTD    +G  P  L+P                        D V+P YV +CK+CE C +  +NLC K  I+  NG M DG+SR +  G++L+H   CST+SEY V+    + +V+P   L   S L CG +TGYGA     KVE+                    +  GA KI+GID    K E  + FG T+ IN
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECIN 245          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 91/244 (37.30%), Postives = 135/244 (55.33%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSE-GFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALNGLM--LDGTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            S+ + I CKA V    GEPL +EEI V PP+  EVR++++  ++CH+D+   +   P   +PR                       D V+PT++ +C DC +C S  SNLC K+P  ++  M   D +SR + + G+ L+H  + S++SEY V+D   VV++D SI  S A  LSCG +TG GAAW+ AKVEK                    R+ GA++IIG+D NP K + G+ FG+T+F+N
Sbjct:   12 SSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVN 255          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 89/240 (37.08%), Postives = 126/240 (52.50%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLD-GTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W  G+PL +EE++  PP++ EVR K+LY ++CHTD+   E     P++PR                       D V+P + GECK+C +C S  SNLC    I ++ G+M+D G SR ++ G+ ++H    ST+SEY VI    V ++DP   L     LSCG +TG GA     K +K                    RM GA++IIG+D NP K E+ + FG TDF+N
Sbjct:    6 KVIKCKAAVAWEAGKPLSMEEVEDAPPQAMEVRDKILYTALCHTDVYFWEANGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKECAHCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIFGLGAVGLAAMEGARMSGASRIIGVDLNPAKHEQAKKFGCTDFVN 245          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 86/240 (35.83%), Postives = 126/240 (52.50%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLC--LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W  G+PL +EE++V PP++ EVRVK+L+ S+CHTD+   E     P++PR                       D V+P + GECK+C +C S  SN+C  L+       ++ DG SR S+ G+ +YH    ST+SEY V+    V +++P   L     LSCG++TG GA+   AK  K                    R+ GA++IIG+D NP + E+   FG T+F+N
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVN 245          
The following BLAST results are available for this feature:
BLAST of CX671617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH2_ORYSJ1.734e-4236.25Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI1.734e-4236.25Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH3_HORVU8.606e-4237.08Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADHL3_ARATH3.270e-4137.94Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADH_MALDO9.515e-4136.99Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PENAM1.243e-4037.08Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADHX_CAEEL3.616e-4037.96Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHL7_ARATH3.616e-4037.30Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADH2_HORVU3.616e-4037.08Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADH1_MAIZE3.616e-4035.83Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671617 ID=CX671617; Name=CX671617; organism=Citrus sinensis; type=EST; length=787bp
ACTAGTTCCAGAGCTCATCTCCGCTCGAAATTCGAAGCTGCAAAATCTAC
AGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGCTGTGG
TATGCTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAGTAGAG
CCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGTGTTTG
TCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTCTATCCTC
GTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGTTGGGGATGAA
GTGAAAGAAGTAAAAGAAGGAGATATTGTGATTCCAACTTATGTTGGAGA
ATGCAAAGATTGTGAAAATTGCACATCACGAATCAGCAATTTATGCCTAA
AATATCCAATAGCACTGAACGGTTTAATGCTTGATGGCACTTCAAGAATG
TCCGTGAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACTTGGTC
TGAATATATGGTCATCGATGCCAATTATGTAGTCAGAGTTGATCCAAGCA
TAGACCTTTCGCATGCTAGCTTCCTTTCATGTGGATTTACAACTGGTTAT
GGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTTGCTGT
TTTAGGCCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAGGATGC
AAGGGGCAGCTAAGATAATTGGGATAGACAAGAACCCATGGAAAAAAGAA
AAGGGGGAAGCTTTTGGAATGACAGATTTCATAAACC
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