CX671613

Overview
NameCX671613
Unique NameCX671613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.106e-88
Identity = 165/216 (76.39%), Postives = 178/216 (82.41%), Query Frame = 3
Query:  231 MGCFPCFDSREDEKLNPEKEPD--DQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            MGCF CFDS +DEKLNP  E +   +KQ QPTVSNNIS LPSG ++L S++NG SKREL LP+DG G  IAA TF FRELAAAT NF P++F+GEGGFGRVYKG L+STGQVVAVKQLDRNGLQGNREFLVE               IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWN RMKIAAGAAKGLE+LHDKANPPVIYRDFK
Sbjct:    1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELLLPRDGLG-QIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFK 215          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.970e-53
Identity = 117/235 (49.79%), Postives = 148/235 (62.98%), Query Frame = 3
Query:  231 MGCFPCF-------DSREDEKLNPE-------KEPDDQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNI-------AAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            MGCF C        ++ +D  +N +           D++  Q   S++ +++   RD   +   GV K +  L  D  G+N+        AQTFTF+ELA AT NFR + F+GEGGFG+V+KG +E   QVVA+KQLDRNG+QG REF+VE               IG+CA+GDQRLLVYE+MP GSLEDHLH LP  K+ LDWNTRMKIAAGAA+GLEYLHD+  PPVIYRD K
Sbjct:    1 MGCFGCSKKSSKRSETNKDTVINRKIVGGTTSVAKSDKRDDQTQPSSDSTKVSPYRDV--NNEGGVGKED-QLSLDVKGLNLNDQVTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLK 232          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.391e-35
Identity = 83/181 (45.86%), Postives = 111/181 (61.33%), Query Frame = 3
Query:  357 DRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            D L S+S+ VS R     +     +   ++FTF EL AAT+NFRP+S +GEGGFG V+KGW++          TG V+AVK+L+++G QG++E+L E               IGYC + + RLLVYEFMP GSLE+HL       + L W  R+K+A GAAKGL +LH+ A   VIYRDFK
Sbjct:   27 DSLGSKSSSVSIRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFK 206          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.494e-34
Identity = 78/153 (50.98%), Postives = 96/153 (62.75%), Query Frame = 3
Query:  441 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            + FTF EL  AT+NFRP+S +GEGGFG V+KGW++ T         G VVAVK+L   G QG++E+L E               +GYC +G+ RLLVYEFMP GSLE+HL       + L W  RMK+A GAAKGL +LHD A   VIYRDFK
Sbjct:   69 KAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHL--FRRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFK 218          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.017e-33
Identity = 75/157 (47.77%), Postives = 100/157 (63.69%), Query Frame = 3
Query:  429 NIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            N   + F+  EL +AT+NFRP+S +GEGGFG V+KGW++          TG V+AVK+L++ G QG+RE+L E               IGYC + + RLLVYEFM  GSLE+HL       + L WNTR+++A GAA+GL +LH+ A P VIYRDFK
Sbjct:   50 NANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFK 205          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.017e-33
Identity = 78/153 (50.98%), Postives = 96/153 (62.75%), Query Frame = 3
Query:  441 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            + FTF EL  ATKNFR ++ +GEGGFG V+KGW++ T         G VVAVKQL   G QG++E+L E               +GYCA+G+ RLLVYEFMP GSLE+HL       + L W  RMK+A GAAKGL +LH+ A   VIYRDFK
Sbjct:   72 KAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHL--FRRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFK 221          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.468e-32
Identity = 73/153 (47.71%), Postives = 99/153 (64.71%), Query Frame = 3
Query:  441 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            ++F+F EL +AT+NFRP+S +GEGGFG V+KGW++          TG V+AVK+L+++G QG++E+L E               IGYC + + RLLVYEFMP GSLE+HL       + L W  R+K+A GAAKGL +LH  +   VIYRDFK
Sbjct:   54 KSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLH-SSETRVIYRDFK 205          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.998e-30
Identity = 73/153 (47.71%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  441 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            ++FTF EL  AT+NFRP+S IGEGGFG V+KGWL+          TG V+AVK+L++ G QG+RE+L E               IGYC + + RLLVYEFM  GSLE+HL       + L W  R+ +A  AAKGL +LH      VIYRD K
Sbjct:   53 KSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDP-VKVIYRDIK 204          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.984e-29
Identity = 80/194 (41.24%), Postives = 108/194 (55.67%), Query Frame = 3
Query:  324 SNNISRLPSGRDRLR-SRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLH-DLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            S  +++  SG D L  S     S    H  +     +   ++F+F EL  AT+NFR +S +GEGGFG V++GWL+ T         G V+AVK+L+ +G QG+RE+L E               IGYC + +QRLLVYEFM  GSLE+HL  +   D + L W  R+K+A  AAKGL +LH      VIYRD K
Sbjct:    7 SRVLNKSSSGLDDLHLSSCKSSSSATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDP-VKVIYRDIK 199          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.420e-29
Identity = 71/159 (44.65%), Postives = 92/159 (57.86%), Query Frame = 3
Query:  411 KDGAGVNIAA-----QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            K+   +N+AA     +  TF +L  AT  F  +S IG GGFG VYK  L+  G  VA+K+L     QG+REF+ E               +GYC  GD+RLLVYEFM  GSLED LHD       L+W+TR KIA G+A+GL +LH   +P +I+RD K
Sbjct:  854 KEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKD-GSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMK 1011          
The following BLAST results are available for this feature:
BLAST of CX671613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PBS1_ARATH1.106e-8876.39Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH1.970e-5349.79Probable serine/threonine-protein kinase RLCKVII O... [more]
APK1B_ARATH5.391e-3545.86Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK2B_ARATH3.494e-3450.98Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
NAK_ARATH1.017e-3347.77Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2A_ARATH1.017e-3350.98Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
APK1A_ARATH1.468e-3247.71Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH3.998e-3047.71Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y3545_ARATH1.984e-2941.24Probable receptor-like protein kinase At3g55450 OS... [more]
BRI1_ARATH4.420e-2944.65Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B06-D12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671613 ID=CX671613; Name=CX671613; organism=Citrus sinensis; type=EST; length=872bp
TTATCAGCTTAAAGTTATTTTTATTTCCTTCTGTTCTTGTTGGATTCATT
TGCTTTGTGCTAAGTGGATATATCGTGAAGGTGGTTTGTACCCAGATGGG
ATTGTTGTTTGGAATATTAACTGTTGTCTGAGTGTGAGAAAAAAAATCTG
CTTTTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCC
CTTTTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTT
TGATTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATC
AAAAGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCT
GGAAGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATT
GCACCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTA
CATTTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTC
ATAGGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCAC
TGGTCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTA
ATAGGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCT
AACCTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCT
TGTCTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATT
TACCACCTGATAAGGAAGCACTTGATTGGAACACAAGAATGAAGATTGCA
GCTGGTGCTGCCAAAGGTTTGGAATACCTCCATGATAAAGCAAACCCTCC
AGTTATCTATAGGGACTTTAAG
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