CX671610

Overview
NameCX671610
Unique NameCX671610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1387 contig Csv1_Contig1387:76..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 8.842e-87
Identity = 173/276 (62.68%), Postives = 192/276 (69.57%), Query Frame = 3
Query:    6 INNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQT--PSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            ++ + LTS+S +QSSL K S    S VA L            +S  S P+LIRNEPVFAAPAPII P W E+M  ++Y                   VAAAKVEQITA LQT   SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKV +E GD  F DQC  CE
Sbjct:    6 LSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCE 281          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.731e-86
Identity = 168/263 (63.88%), Postives = 191/263 (72.62%), Query Frame = 3
Query:   12 NWCLTSVSQAQSSLIKSSTLRPSIVARLN---SPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            N CLT +S AQ+SL K +  RP   ARL+   S  S PSLIRNEPVFAAP PIINP  RE+MA +SY                  P+AAA+V+QITA+LQ+   +K FD VE +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+AN+VP YD+T+            LHLKV NIVVIGHSACGGIKGLMS   DG+ ST FIEDWVKIG+PAK+KV  EH DK F DQCT CE
Sbjct:    7 NSCLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPIINPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACE 266          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.943e-82
Identity = 162/271 (59.78%), Postives = 193/271 (71.22%), Query Frame = 3
Query:    3 SINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASP-----PSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAF---DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            SIN + L+S+S A++S  K +TLRP + A LN+ +S      PSLI+++PVFA+ +PII P  RE+M  + Y                    AA KVEQITAQL T S +      ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SF FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CE
Sbjct:    5 SINGFSLSSLSPAKTST-KRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMG-KGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCE 273          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 298.901 bits (764), Expect = 2.109e-80
Identity = 157/263 (59.70%), Postives = 186/263 (70.72%), Query Frame = 3
Query:   12 NWCLTSVSQAQSSLIKSSTLRPSIVA--RLNSPAS-PPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            N CLTS+S +++ L  +STLRP+ +A  R+N  +S PPSLIRN+PVFAAPAPII P  +EDMA   Y                    AA+KV QIT++L       A   V+RIKEGFI FK+EKYEKNPALY EL+KGQ+PK+MVFACSDSRVCPSHVLDFQPGEAF+VRN+AN+VP +D+ K            LHLKV NIVVIGHSACGGIKGLMSF   G  +TDFIEDWVKI +PAK KV  EHG+  F +QCT+CE
Sbjct:    5 NGCLTSISPSRTQLKNTSTLRPTFIANSRVNPSSSVPPSLIRNQPVFAAPAPIITPTLKEDMA---YEEAIAALKKLLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCE 264          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.978e-79
Identity = 152/256 (59.38%), Postives = 175/256 (68.36%), Query Frame = 3
Query:   24 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV  EH      DQC  CE
Sbjct:   23 SSTSSARSGVLSAKFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCE 275          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.196e-79
Identity = 152/256 (59.38%), Postives = 175/256 (68.36%), Query Frame = 3
Query:   24 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV  EH      DQC  CE
Sbjct:   23 SSTSSARSGVLSARFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCE 275          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 8.863e-79
Identity = 151/262 (57.63%), Postives = 174/262 (66.41%), Query Frame = 3
Query:    6 INNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            +N   L   S +  S + S+    +  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAA +++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV  EH      DQC  CE
Sbjct:   15 VNASSLKKASTSARSGVLSARFTCNSSSSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKTLIEKGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCE 275          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.579e-78
Identity = 146/232 (62.93%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   96 NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NP LY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV  EH      DQC  CE
Sbjct:   44 SSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCE 274          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 5.758e-70
Identity = 134/204 (65.69%), Postives = 149/204 (73.04%), Query Frame = 3
Query:  186 MANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQ--TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            M N+SY                   VAAAKV++ITA+LQ  + SD+K+FD VERIKEGF+ FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF PG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKV  E     F DQC  CE
Sbjct:    1 MGNESYEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCE 204          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.743e-48
Identity = 91/135 (67.41%), Postives = 101/135 (74.81%), Query Frame = 3
Query:  387 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            NP LY ELAKGQSPK++VFACSDSRVCPSH+LDFQPGEAFVVRN+AN+VPPYD  K            LHLKV NIVVIGHS CGGIKGLMS   DG  ++DFIE WVK+G+PAKSKV     +  F D CT CE
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCE 135          
The following BLAST results are available for this feature:
BLAST of CX671610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAHC_ARATH8.842e-8762.68Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_TOBAC5.731e-8663.88Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_PEA2.943e-8259.78Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_SPIOL2.109e-8059.70Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHX_FLABR3.978e-7959.38Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI5.196e-7959.38Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABI8.863e-7957.63Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLAPR2.579e-7862.93Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAH2_ARATH5.758e-7065.69Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAH2_FLALI4.743e-4867.41Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671610 ID=CX671610; Name=CX671610; organism=Citrus sinensis; type=EST; length=792bp
CTTCGATCAATAACTGGTGCCTTACTTCTGTTTCTCAAGCTCAATCCTCT
CTCATCAAAAGCTCCACATTACGTCCCTCCATCGTTGCAAGGCTCAACTC
TCCTGCTTCTCCTCCTAGCCTCATCCGAAACGAGCCCGTTTTTGCTGCAC
CAGCTCCTATCATCAACCCTAACTGGAGGGAAGACATGGCAAATCAGTCG
TACGAGGAAGCCATTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGAAGA
CTTGAAACCTGTTGCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGCTAC
AGACTCCATCTGACACCAAAGCATTTGATTCCGTGGAGAGGATCAAAGAG
GGCTTCATTCACTTCAAGAGAGAAAAATACGAGAAAAATCCAGCTCTGTA
CTCTGAGCTCGCCAAAGGCCAAAGCCCGAAGTATATGGTATTTGCCTGCT
CAGACTCCAGGGTTTGCCCGTCCCATGTGTTGGATTTTCAACCTGGGGAA
GCTTTCGTGGTTCGCAATGTTGCTAACATTGTTCCACCCTATGATCAGAC
TAAATATGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATCTCA
AGGTTTCAAACATTGTGGTCATTGGGCACAGCGCCTGTGGTGGCATCAAA
GGACTCATGTCTTTCACATTTGATGGAAACAACTCCACCGATTTCATTGA
AGACTGGGTGAAAATTGGCATCCCTGCCAAGTCTAAGGTGTTTACAGAGC
ATGGTGACAAGCCTTTTGGAGACCAATGCACATACTGTGAAA
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