CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:667..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 8.011e-97
Identity = 166/190 (87.37%), Postives = 178/190 (93.68%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            STTG+LEAAYHQAFGKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTE+AYPYTGKD  CKFS+ENVGVQVL+SVNITLGAEDEL+HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct:  169 STTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 358          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.331e-96
Identity = 165/190 (86.84%), Postives = 177/190 (93.16%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            STTG+LEAAYHQAFGKGISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG CKFS++N+GVQV DSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  CGNTPMDVNHAV+AVGYGVED VPYWLIKNSWG  WGD+GYFKMEMGKNMCG+ATC+SYPVVA
Sbjct:  169 STTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVVA 358          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.166e-93
Identity = 160/190 (84.21%), Postives = 173/190 (91.05%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            STTG+LEAAY QA GK ISLSEQQLVDC  AFNN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+CKF +ENVGV+VLDSVNITLGAEDEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct:  171 STTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.197e-92
Identity = 158/190 (83.16%), Postives = 177/190 (93.16%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            STTG+LEAAY QAFGKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK+NGGLDTEEAYPYTGK+G+CKFS  N+GV+V+ SVNITLGAE EL++AV LVRPVSVAFEVV GF+ YKSGVY+ST+CG+TPMDVNHAV+AVGYGVE+G PYWLIKNSWG +WG+ GYFKMEMGKNMCG+ATCASYP+VA
Sbjct:  167 STTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIVA 356          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 7.760e-92
Identity = 157/190 (82.63%), Postives = 176/190 (92.63%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            STTGSLEAAY QA GK +SLSEQQLVDCA A+NN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  ENVGV+VLDSVNITLGAEDEL++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct:  173 STTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 362          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.708e-89
Identity = 155/190 (81.58%), Postives = 170/190 (89.47%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            STTG+LEAAY QA GK ISLSEQQLVDCA  FNN GCNGGLPSQAFEYIKYNGG+DTEE+YPY G +GVC + +EN  VQVLDSVNITL AEDEL++AVGLVRPVSVAF+V+DGFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMC IATCASYPVVA
Sbjct:  172 STTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVVA 361          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.073e-64
Identity = 116/188 (61.70%), Postives = 140/188 (74.47%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 843
            STTG+LE+A   A GK ++L+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E++YPY GK+G CKF+ E     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG NWG++GYF +E GKNMCG+A CASYP+
Sbjct:  143 STTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPI 330          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.845e-64
Identity = 113/188 (60.11%), Postives = 137/188 (72.87%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 843
            STTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ YPY G+D  CKF  +     V D  NIT+  E+ +  AV L  PVS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP+
Sbjct:  145 STTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.845e-64
Identity = 115/188 (61.17%), Postives = 139/188 (73.94%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 843
            STTG+LE+A   A GK +SL+EQQLVDCAQAFNN GC GGLPSQAFEYI YN G+  E++YPY GKD  C+F+ +     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A CASYP+
Sbjct:  143 STTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPI 330          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 242.662 bits (618), Expect = 1.992e-63
Identity = 114/188 (60.64%), Postives = 136/188 (72.34%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 843
            STTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP+
Sbjct:  145 STTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
ALEU_ARATH8.011e-9787.37Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
ALEUL_ARATH2.331e-9686.84Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CYSP2_MAIZE9.166e-9384.21Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CYSP3_SOLLC1.197e-9283.16Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
ORYC_ORYSJ7.760e-9282.63Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
ALEU_HORVU4.708e-8981.58Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATH_RAT3.073e-6461.70Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_PIG6.845e-6460.11Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_MOUSE6.845e-6461.17Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATH_HUMAN1.992e-6360.64Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
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