CX671604

Overview
NameCX671604
Unique NameCX671604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:586..1396. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.011e-66
Identity = 130/193 (67.36%), Postives = 146/193 (75.65%), Query Frame = -1
Query:  234 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 812
            LCAGIT YSPL+YFGL +                             VISTSP K+ EAL+HLGADSFL SRD DQ+Q A+GT+DGIIDTVSA HP+LPL+GLL S GKLV+VGAP+KPLELPV  L+MGRK V+GS  GGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  163 LCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.899e-64
Identity = 126/195 (64.62%), Postives = 146/195 (74.87%), Query Frame = -1
Query:  228 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 812
            LCAG+TVYSPLK+F L +                             VISTSP+KK EA+  LGADSF+ SR+P+Q+Q AMGTLDGIIDTVSA HP+LPLLGLLKSQGK+++VG PDKPLELPV  L+ GRK ++GS  GGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  166 LCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.894e-62
Identity = 123/193 (63.73%), Postives = 143/193 (74.09%), Query Frame = -1
Query:  234 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 812
            LCAGIT YSPL+Y GL +                             VISTS SKK EALE LGAD FL S D DQ+Q A GTL GIIDTVSA+HP++PLLGLLK  GKLV+VGAP+KPLELPV  L+MGRK ++GS+ GG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  142 LCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 2.297e-61
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = -1
Query:  225 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 812
            LCAG+TVYSP+KY GL +                             VISTS  K+ EA+  LGAD+FL SRDP Q++ AMGT+DGIIDTVSA HP+LPLLGLLK++GKLV+VGAP +PLELPV  LI GRK V GS  GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  161 LCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.489e-60
Identity = 124/193 (64.25%), Postives = 140/193 (72.54%), Query Frame = -1
Query:  234 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 812
            LCAGITVYSP+KY GL +                             VISTS  K+ EA+  LGAD+FL SRDP Q++ AMGT+DGIIDTVSA H +LPLLGLLK +GKLV+VGAP+KPLELPV+ LI  RK V GS  GG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  161 LCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.789e-59
Identity = 116/193 (60.10%), Postives = 139/193 (72.02%), Query Frame = -1
Query:  234 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 812
            LCAGIT YSPLKYFGL +                             VISTS SKK EA++HLG D F+ S DP Q+Q A+GTLDGIIDTVSA HPI+PLL LLK  GKL++VG PDKPL+LPV  LI GR+T++GS  GG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  165 LCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 3.104e-58
Identity = 113/194 (58.25%), Postives = 140/194 (72.16%), Query Frame = -1
Query:  231 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 812
            LCAGITVYSP+KY+G+ E                             VIS+S +K  EA+ HLGADSFL + DP +++ A+GT+D IIDT+SAVH + PLLGLLK  GKL+ +G P+KPLELP+  L++GRK V GS  GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  165 LCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.916e-58
Identity = 113/195 (57.95%), Postives = 140/195 (71.79%), Query Frame = -1
Query:  228 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 812
            LCAGITVYSP+KY+G+ E                             VISTSP+K+TEA++ LGADSFL S+DP++++ AMGT+D IIDT+SA H ++PLLGLLK  GKLV VG P KPLEL V  L+ GRK + GS+ GGMKETQEM+DF  KHNITADIE+I M  +NTAMERL KADV+YRFVID+AN+ ++
Sbjct:  164 LCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.541e-57
Identity = 115/197 (58.38%), Postives = 142/197 (72.08%), Query Frame = -1
Query:  222 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 812
            LCAGI++YSP+KYFGL                               V+S++  K  +AL+ LGAD FL S D DQ++ AMGT+DGIIDTVSA H I PL+GLLKS GKLVL+GA +KP ++   SLI+GRK+++GS  GGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  166 LCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.432e-57
Identity = 116/193 (60.10%), Postives = 135/193 (69.95%), Query Frame = -1
Query:  234 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 812
            LCAGIT YSPLKY+GL +                             VI  S SK+ EALE LGADSFL + D +Q++GA  +LDGIIDTV   HP+ PL  LLK  GKLV+VGAP+KP ELPV SL+ GRK + G+  GG+KETQEM+DFAAKHNITAD+EVI MDYVNTAMERL K+DVRYRFVIDIANT+
Sbjct:  165 LCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTM 357          
The following BLAST results are available for this feature:
BLAST of CX671604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
MTDH_FRAAN9.011e-6667.36Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR2.899e-6464.62Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_PETCR7.894e-6263.73Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH2.297e-6162.76Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH8_ARATH1.489e-6064.25Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
GEDH1_OCIBA4.789e-5960.10Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH9_ARATH3.104e-5858.25Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_MEDSA6.916e-5857.95Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH6_ARATH1.541e-5758.38Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH_APIGR3.432e-5760.10Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B01-D2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671604 ID=CX671604; Name=CX671604; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTTTTTTTTTTTTATATGAACAATGTTTTATTTCATTAACATTTAT
AGTTTTTTTGGCAATCACGACATAATTAGGGTGATGTAACTGGAAATTAA
AAGTAATTTAAGCGCTAAAAGAGTGTAATGATCGAGGGAGCATTACATAT
AGCAAAGTGGATCATGGAACAAAGTTGTGAATTGAAGACACCAATCTGAT
TCTGATTCTGATTCTTCAAGGTTTGGTGGCGGCCAAGGTGTTTGCAATAT
CAATGACAAATCGATACCGAACATCAGCCTTGGCGAGCCGCTCCATTGCC
GTATTGACATAATCCATCGAAATAACCTCAATGTCAGCTGTTATATTGTG
TTTTGCTGCAAAATCAATCATCTCTTGCGTCTCTTTCATTCCCCCAGTGC
TGCTCCCTGACACCGTCTTCCTCCCCATAATTAAGGAAATCACAGGTAGC
TCGAGTGGCTTGTCCGGAGCACCAACCAGAACAAGCTTGCCCTGGGACTT
TAATAGACCGAGCAATGGCAAAATGGGGTGCACAGCGGACACCGTGTCAA
TAATACCATCCAATGTGCCCATGGCACCCTGCAATTGGTCAGGGTCACGG
CTATTCAAAAATGAATCAGCGCCAAGATGTTCAAGAGCTTCAGTCTTCTT
GCTTGGAGAGGTGCTAATTACTGTCACTTTGGCCCCAAAAGCCTTGGCAA
ATTTGACAGCGACATGACCAAGCCCGCCAAGGCCAACGATGCCTACATGC
TTTCCTTGTTCTGCTAGTCCAAAGTATTTCAATGGACTGTACACGGTAAT
CCCGGCGCAAAG
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