CX671599

Overview
NameCX671599
Unique NameCX671599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12684 contig Csv1_Contig12684:822..1652. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671599 vs. ExPASy Swiss-Prot
Match: ACOT8_RAT (Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicus GN=Acot8 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.195e-28
Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = -2
Query:  207 AIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXLTDPRLPRSYR---NKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSPKPKPIPVSKL 827
            A+Q G  IF   ASFQ+ +      + +MP VP P             L DP L   YR   N++A++E    PI+I+   P +        P   +W RA+G + + D  +H CV A+ SD  F   +L PH+ K      +SLDHSMWFH  FRAD W+L+   SP A  +RG V G ++   G L V+  QE ++RS KP+ +  SKL
Sbjct:  115 AVQHGKAIFICQASFQQMQPSPLQHQFSMPTVPPPEELLDHEALIDQYLRDPNLHEKYRVGLNRIAAREV---PIEIKLVNPPALNQLQTLEPKQMFWVRARGYIGEGDIKMHCCVAAYISDYAFLGTALLPHQSKYKVNFMVSLDHSMWFHAPFRADHWMLYECESPWAGGSRGLVHGRLWRRDGVLAVTCAQEGVIRS-KPR-VSESKL 320          
BLAST of CX671599 vs. ExPASy Swiss-Prot
Match: ACOT8_MOUSE (Acyl-coenzyme A thioesterase 8 OS=Mus musculus GN=Acot8 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.477e-28
Identity = 74/199 (37.19%), Postives = 102/199 (51.26%), Query Frame = -2
Query:  243 AIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXLTDPRLPRSYR---NKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 827
            A+Q G  IF   ASFQ+ +      + +MP VP P             L DP L + YR   N+VA++E    PI+I+   P + T      P   +W RA+G + + D  +H CV A+ SD  F   +L PH+ K       SLDHSMWFH  FRAD W+L+   SP A  +RG V G ++   G L V+  QE ++R
Sbjct:  115 AVQHGKAIFICQASFQQMQPSPLQHQFSMPSVPPPEDLLDHEALIDQYLRDPNLHKKYRVGLNRVAAQEV---PIEIKVVNPPTLTQLQALEPKQMFWVRARGYIGEGDIKMHCCVAAYISDYAFLGTALLPHQSKYKVNFMASLDHSMWFHAPFRADHWMLYECESPWAGGSRGLVHGRLWRRDGVLAVTCAQEGVIR 310          
BLAST of CX671599 vs. ExPASy Swiss-Prot
Match: TESB_ECOLI (Acyl-CoA thioesterase 2 OS=Escherichia coli (strain K12) GN=tesB PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27
Identity = 75/199 (37.69%), Postives = 105/199 (52.76%), Query Frame = -2
Query:  240 AIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXLTDPRLPRSYRNKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASL---SLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 827
            AIQ G  IF + ASFQ  E GFEHQ+T MP  PAP                  LP   ++K         P+++R  E ++      + P  + W RA G + DD  +H+ ++ +ASDL F  V+L PH   GF    +   ++DHSMWFHR F  ++WLL+ + S  AS ARGFV GE +   G L+ S  QE ++R+
Sbjct:   94 AIQNGKPIFYMTASFQAPEAGFEHQKT-MPSAPAPDGLPSETQIAQSLAH--LLPPVLKDKFICDR----PLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGI-GFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRN 284          
BLAST of CX671599 vs. ExPASy Swiss-Prot
Match: TESB_ECO57 (Acyl-CoA thioesterase 2 OS=Escherichia coli O157:H7 GN=tesB PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27
Identity = 75/199 (37.69%), Postives = 105/199 (52.76%), Query Frame = -2
Query:  240 AIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXLTDPRLPRSYRNKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASL---SLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 827
            AIQ G  IF + ASFQ  E GFEHQ+T MP  PAP                  LP   ++K         P+++R  E ++      + P  + W RA G + DD  +H+ ++ +ASDL F  V+L PH   GF    +   ++DHSMWFHR F  ++WLL+ + S  AS ARGFV GE +   G L+ S  QE ++R+
Sbjct:   94 AIQNGKPIFYMTASFQAPEAGFEHQKT-MPSAPAPDGLPSETQIAQSLAH--LLPPVLKDKFICDR----PLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGI-GFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRN 284          
BLAST of CX671599 vs. ExPASy Swiss-Prot
Match: ACOT8_HUMAN (Acyl-coenzyme A thioesterase 8 OS=Homo sapiens GN=ACOT8 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27
Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = -2
Query:  243 AIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXLTDPRLPRSYR---NKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 827
            A+Q G  IF   ASFQ+ +      + +MP VP P             L DP L + Y    N++A++E    PI+I+   P+  +   +  P   +W RA+G + + D  +H CV A+ SD  F   +L PH+ +      +SLDHSMWFH  FRAD W+L+   SP A  +RG V G ++   G L V+  QE ++R
Sbjct:  114 AVQHGKPIFICQASFQQAQPSPMQHQFSMPTVPPPEELLDCETLIDQYLRDPNLQKRYPLALNRIAAQEV---PIEIKPVNPSPLSQLQRMEPKQMFWVRARGYIGEGDMKMHCCVAAYISDYAFLGTALLPHQWQHKVHFMVSLDHSMWFHAPFRADHWMLYECESPWAGGSRGLVHGRLWRQDGVLAVTCAQEGVIR 309          
BLAST of CX671599 vs. ExPASy Swiss-Prot
Match: TESB_HAEIN (Acyl-CoA thioesterase 2 OS=Haemophilus influenzae GN=tesB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.117e-21
Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = -2
Query:  243 AIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXLTDPRLPRSYRNKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRR----KGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 827
            AIQ  N I  + ASFQ  E+GFEHQ T MP V AP                  LP     K A++     P ++R    N+  N +K P     WF+  G+   D  + +C++A+ SD      +L+PH +    KG + A++  DHS+WFHR F  + W L  I S  A   RG   G++F+  G+L+ +  QE L+R
Sbjct:   94 AIQHKNTICHVTASFQVPEKGFEHQNT-MPNVGAPEDFTDENVMLQKVAQT--LPEPLNEKFAAER----PFEVRTKYLNNPFNGTKLPAEQYSWFKTNGETPLDIKIQQCLLAYFSDFHCILTALHPHEKGFLQKGMKVATI--DHSIWFHRPFDLNHWHLHAIESNNAFGGRGLAQGQIFSQDGQLIATTQQEGLIR 283          
The following BLAST results are available for this feature:
BLAST of CX671599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ACOT8_RAT1.195e-2836.97Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicu... [more]
ACOT8_MOUSE3.477e-2837.19Acyl-coenzyme A thioesterase 8 OS=Mus musculus GN=... [more]
TESB_ECOLI6.557e-2737.69Acyl-CoA thioesterase 2 OS=Escherichia coli (strai... [more]
TESB_ECO576.557e-2737.69Acyl-CoA thioesterase 2 OS=Escherichia coli O157:H... [more]
ACOT8_HUMAN6.557e-2735.18Acyl-coenzyme A thioesterase 8 OS=Homo sapiens GN=... [more]
TESB_HAEIN4.117e-2134.17Acyl-CoA thioesterase 2 OS=Haemophilus influenzae ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12A10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A10-B20-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671599 ID=CX671599; Name=CX671599; organism=Citrus sinensis; type=EST; length=831bp
ATAAAGAAATAATACATTGTCGGATCTATTGCCAGCAGTACGAGCTTGAA
TGCGATATTACAATTGATTTATAGCAATTTATTTATGGTGTGTGAAATGA
AAGAGATATTGCGCAAAACTCTACGGGGCATCGAAGCAAGCAAAGAGGTT
CCCTCAGGATTTTACTGCAGTGTTTTTACGCAAACGTTCTATTTAATACC
TGTTCATAACTTCGATACAGGTATTGGTTTCGGTTTAGGGCTCCTCAGTA
AGGCCTCTTGAGTCAATGATACAAGCAGCTCTCCCTTTGTGTTAAACATT
TCCCCTGAAACAAAACCGCGTGCCTTGGATGCAACAGGACTCACAATCAC
AAACAACAACCAGTCATCAGCCCTAAAAGACCGGTGAAACCACATCGAGT
GGTCCAGACTGAGAGAAGCTGTTCTGAAACCCTTTCTACGGTGGGGATTC
AAACTAACTGAACTGAATATTAGATCTGAAGCAAATGCCACCACACATCT
ATGCAGAGCCTGGTCGTCTGAAAGTTTCCCTTTGGCTCTGAACCAGTACC
TCAAGCTTGGTGGAGATTTACTCTGATTAGTATAACTGTTCGGCTCGCAA
AACCTTATATCTATGGGCCACGGGACAAATTCTTTTGAGGCAACCTTGTT
TCGATAGCTCCTAGGAAGGCGAGGATCTGTGAGACGTCTCTCGCGTAGCT
CTTCCATTGACAGAAGCATTTCTGGAGCTGGCACTAGTGGCATAGTCGTC
TCCTGGTGTTCAAATCCCTGCTCTTCTTTTTGAAATGAAGCGAGCAAAGT
GAATATGATGTTTCCTTTTTGTATTGCATCA
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