CX671598

Overview
NameCX671598
Unique NameCX671598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12684 contig Csv1_Contig12684:345..1241. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671598 vs. ExPASy Swiss-Prot
Match: ACOT8_MOUSE (Acyl-coenzyme A thioesterase 8 OS=Mus musculus GN=Acot8 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.295e-28
Identity = 76/225 (33.78%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  215 LVENILHLEPVEVNIFQGITLPDAPKFGKVFXXXXXXXXXXXXSKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXXTDPRLPRSYR---NKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHRRK 877
            LV ++L+LEP++ ++++G      P   ++F            +K+V     VHSLHCYF+  GD  +P++Y V R+R G SF+ R V A+Q G  IF   ASFQ+ +      + +MP VP P               DP L + YR   N+VA++E    PI+I+   P + T      P   +W RA+G + + D  +H CV A+ SD  F   +L PH+ K
Sbjct:   27 LVTSVLNLEPLDEDLYRGRHYW-VPTSQRLFGGQIMGQALVAAAKSVSEDVHVHSLHCYFVRAGDPKVPVLYHVERIRTGASFSVRAVKAVQHGKAIFICQASFQQMQPSPLQHQFSMPSVPPPEDLLDHEALIDQYLRDPNLHKKYRVGLNRVAAQEV---PIEIKVVNPPTLTQLQALEPKQMFWVRARGYIGEGDIKMHCCVAAYISDYAFLGTALLPHQSK 247          
BLAST of CX671598 vs. ExPASy Swiss-Prot
Match: ACOT8_HUMAN (Acyl-coenzyme A thioesterase 8 OS=Homo sapiens GN=ACOT8 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.139e-27
Identity = 75/225 (33.33%), Postives = 113/225 (50.22%), Query Frame = 2
Query:  215 LVENILHLEPVEVNIFQG--ITLPDAPKFGKVFXXXXXXXXXXXXSKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXXTDPRLPRSY---RNKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHR 871
            LV  +L+LEP++ ++F+G    +P    FG               S+ V     VHSLHCYF+  GD  +P++YQV R R G+SF+ R V A+Q G  IF   ASFQ+ +      + +MP VP P               DP L + Y    N++A++E    PI+I+   P+  +   +  P   +W RA+G + + D  +H CV A+ SD  F   +L PH+
Sbjct:   27 LVTTVLNLEPLDEDLFRGRHYWVPAKRLFGGQIVGQALVAAAKSVSEDVH----VHSLHCYFVRAGDPKLPVLYQVERTRTGSSFSVRSVKAVQHGKPIFICQASFQQAQPSPMQHQFSMPTVPPPEELLDCETLIDQYLRDPNLQKRYPLALNRIAAQEV---PIEIKPVNPSPLSQLQRMEPKQMFWVRARGYIGEGDMKMHCCVAAYISDYAFLGTALLPHQ 244          
BLAST of CX671598 vs. ExPASy Swiss-Prot
Match: ACOT8_RAT (Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicus GN=Acot8 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.943e-27
Identity = 74/225 (32.89%), Postives = 112/225 (49.78%), Query Frame = 2
Query:  215 LVENILHLEPVEVNIFQGITLPDAPKFGKVFXXXXXXXXXXXXSKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXXTDPRLPRSYR---NKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHRRK 877
            LV ++L+LEP++ ++++G      P   ++F            +K+V     VHSLHCYF+  GD  +P++Y V R R G SF+ R V A+Q G  IF   ASFQ+ +      + +MP VP P               DP L   YR   N++A++E    PI+I+   P +        P   +W RA+G + + D  +H CV A+ SD  F   +L PH+ K
Sbjct:   27 LVTSVLNLEPLDEDLYRGRHYW-VPTSQRLFGGQIVGQALVAAAKSVSEDVHVHSLHCYFVRAGDPKVPVLYHVERTRTGASFSVRAVKAVQHGKAIFICQASFQQMQPSPLQHQFSMPTVPPPEELLDHEALIDQYLRDPNLHEKYRVGLNRIAAREV---PIEIKLVNPPALNQLQTLEPKQMFWVRARGYIGEGDIKMHCCVAAYISDYAFLGTALLPHQSK 247          
BLAST of CX671598 vs. ExPASy Swiss-Prot
Match: TESB_ECOLI (Acyl-CoA thioesterase 2 OS=Escherichia coli (strain K12) GN=tesB PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 78/218 (35.78%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  227 ILHLEPVEVNIFQGITLPDAPKFGKVFXXXXXXXXXXXXSKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXXTDPRLPRSYRN---KVASKEFV-PWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPH 868
            +L+LE +E  +F+G +  +     +VF             +TV   ++VHS H YFL  GD   PIIY V  +RDGNSF+ RRV AIQ G  IF + ASFQ  E GFEHQ+ TMP  PAP              ++ ++ +S  +    V   +F+   P+++R  E ++      + P  + W RA G + DD  +H+ ++ +ASDL F  V+L PH
Sbjct:   11 LLNLEKIEEGLFRGQS--EDLGLRQVFGGQVVGQALYAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQK-TMPSAPAP----------DGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPH 215          
BLAST of CX671598 vs. ExPASy Swiss-Prot
Match: TESB_ECO57 (Acyl-CoA thioesterase 2 OS=Escherichia coli O157:H7 GN=tesB PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 78/218 (35.78%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  227 ILHLEPVEVNIFQGITLPDAPKFGKVFXXXXXXXXXXXXSKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXXTDPRLPRSYRN---KVASKEFV-PWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPH 868
            +L+LE +E  +F+G +  +     +VF             +TV   ++VHS H YFL  GD   PIIY V  +RDGNSF+ RRV AIQ G  IF + ASFQ  E GFEHQ+ TMP  PAP              ++ ++ +S  +    V   +F+   P+++R  E ++      + P  + W RA G + DD  +H+ ++ +ASDL F  V+L PH
Sbjct:   11 LLNLEKIEEGLFRGQS--EDLGLRQVFGGQVVGQALYAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQK-TMPSAPAP----------DGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPH 215          
BLAST of CX671598 vs. ExPASy Swiss-Prot
Match: TESB_HAEIN (Acyl-CoA thioesterase 2 OS=Haemophilus influenzae GN=tesB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.947e-19
Identity = 73/226 (32.30%), Postives = 106/226 (46.90%), Query Frame = 2
Query:  215 LVENILHL---EPVEVNIFQGITLPDAPKFGKVFXXXXXXXXXXXXSKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPXXXXXXXXXXXXXXTDPRLPRSYRNKVASKEFVPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGF 883
            ++ N++HL   E ++  IF+G +      F +VF             +     +I+HS H YFL  GD   PIIY V  +R+G +F+   V AIQ  N I  + ASFQ  E+GFEHQ  TMP V AP                  LP     K A++     P ++R    N+  N +K P     WF+  G+   D  + +C++A+ SD      +L+PH  KGF
Sbjct:    4 ILNNLIHLLKLEKIDDLIFRGESQDLG--FRQVFGGQVVAQALSAAMQVAPEDRILHSCHAYFLAPGDSQYPIIYDVETLREGRNFSALCVKAIQHKNTICHVTASFQVPEKGFEHQ-NTMPNVGAP--EDFTDENVMLQKVAQTLPEPLNEKFAAER----PFEVRTKYLNNPFNGTKLPAEQYSWFKTNGETPLDIKIQQCLLAYFSDFHCILTALHPH-EKGF 219          
The following BLAST results are available for this feature:
BLAST of CX671598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ACOT8_MOUSE2.295e-2833.78Acyl-coenzyme A thioesterase 8 OS=Mus musculus GN=... [more]
ACOT8_HUMAN1.139e-2733.33Acyl-coenzyme A thioesterase 8 OS=Homo sapiens GN=... [more]
ACOT8_RAT1.943e-2732.89Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicu... [more]
TESB_ECOLI2.805e-2635.78Acyl-CoA thioesterase 2 OS=Escherichia coli (strai... [more]
TESB_ECO572.805e-2635.78Acyl-CoA thioesterase 2 OS=Escherichia coli O157:H... [more]
TESB_HAEIN1.947e-1932.30Acyl-CoA thioesterase 2 OS=Haemophilus influenzae ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12A10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A10-B20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671598 ID=CX671598; Name=CX671598; organism=Citrus sinensis; type=EST; length=897bp
TGTGTCAGACTCAGTTCAGGCTGAGGAAGAAGATCGTCCTGAATTTCAGT
TAAAACGATATGATTACTTTGGACATGGGTCGCCCACAATCTTCCGGCAG
GGAGATGTAATTGCTTTGACAGAGCTGACCTGCTTAGTGCTGCCGCATGA
ACATTGCAATTGGCTTGAAACAAAATCAATCTGGAGTGCAGATAAGACAG
TTGGGACATGCTCACTTGTGGAGAATATATTGCATTTAGAGCCTGTAGAG
GTGAATATATTTCAAGGGATCACATTGCCAGATGCTCCAAAATTTGGAAA
GGTCTTCGGAGGACAGTTAGTTGGGCAGGCGCTGGCTGCAGCATCAAAGA
CTGTTGATTGTCTTAAAATTGTCCATAGTTTGCACTGCTACTTTCTTCTG
GTTGGGGATTTAAACATTCCAATTATATACCAAGTTCACCGTGTACGTGA
CGGCAATAGCTTTGCAACCCGAAGAGTTGATGCAATACAAAAAGGAAACA
TCATATTCACTTTGCTCGCTTCATTTCAAAAAGAAGAGCAGGGATTTGAA
CACCAGGAGACGACTATGCCACTAGTGCCAGCTCCAGAAATGCTTCTGTC
AATGGAAGAGCTACGCGAGAGACGTCTCACAGATCCTCGCCTTCCTAGGA
GCTATCGAAACAAGGTTGCCTCAAAAGAATTTGTCCCGTGGCCCATAGAT
ATAAGGTTTTGCGAGCCGAACAGTTATACTAATCAGAGTAAATCTCCACC
AAGCTTGAGGTACTGGTTCAGAGCCAAAGGGAAACTTTCAGACGACCAGG
CTCTGCATAGATGTGTGGTGGCATTTGCTTCAGATCTAATATTCAGTTCA
GTTAGTTTGAATCCCCACCGTAGAAAGGGTTTCAGAGCAGCTTCTCT
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