CX671595

Overview
NameCX671595
Unique NameCX671595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5073 contig Csv1_Contig5073:1..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671595 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 47/72 (65.28%), Postives = 52/72 (72.22%), Query Frame = 1
Query:   34 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCSLNNDLKDLAQKCVDATKIAGF 249
            MAASLQAAATLMQPTKVGV PA            VSKAFGV+ A AR++CSL  +LKDLAQK  DA K+AGF
Sbjct:    1 MAASLQAAATLMQPTKVGVAPARNNLQLRSAQS-VSKAFGVEPAAARLTCSLQTELKDLAQKFTDAAKVAGF 71          
BLAST of CX671595 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.496e-15
Identity = 46/72 (63.89%), Postives = 51/72 (70.83%), Query Frame = 1
Query:   34 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCSLNNDLKDLAQKCVDATKIAGF 249
            MAASLQAAATLMQPTKVG V A            VSKAFG++ + +R+SCSL  DLKD AQKC DA KIAGF
Sbjct:    1 MAASLQAAATLMQPTKVGGVSARNNLQLRSSQS-VSKAFGLEPSASRLSCSLQTDLKDFAQKCTDAAKIAGF 71          
BLAST of CX671595 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.161e-14
Identity = 43/72 (59.72%), Postives = 49/72 (68.06%), Query Frame = 1
Query:   34 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCSLNNDLKDLAQKCVDATKIAGF 249
            MAASLQAAATLMQPTKVGV               VSKAFGV+    R++CSL  ++K+LAQKC DA KIAGF
Sbjct:    1 MAASLQAAATLMQPTKVGV----RNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGF 68          
BLAST of CX671595 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1
Query:   34 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCSLNNDLKDLAQKCVDATKIAGF 249
            MAASLQAAATLMQPTK+                 VSKAFG++  GA+++CSL +D K+LA KCV+A+KIAGF
Sbjct:    1 MAASLQAAATLMQPTKL-----RSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVEASKIAGF 67          
BLAST of CX671595 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1
Query:   34 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCSLNNDLKDLAQKCVDATKIAGF 249
            MA SLQAAAT +QP K+   P+            V K+FG+DS+ AR++CSL++DLKD A KC DA KIAGF
Sbjct:    1 MATSLQAAATFLQPAKIAASPSRNVHLRSNQT--VGKSFGLDSSQARLTCSLHSDLKDFAGKCSDAAKIAGF 70          
BLAST of CX671595 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11
Identity = 41/73 (56.16%), Postives = 48/73 (65.75%), Query Frame = 1
Query:   34 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSA--GARISCSLNNDLKDLAQKCVDATKIAG 246
            MAASLQA+ T +QPTKV    A            V KAFGV+SA  G R+S SL +DLK+LA KCVDATK+AG
Sbjct:    1 MAASLQASTTFLQPTKV----ASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANKCVDATKLAG 69          
The following BLAST results are available for this feature:
BLAST of CX671595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PSBO_TOBAC3.938e-1665.28Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU1.496e-1563.89Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC2.161e-1459.72Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_PEA9.079e-1355.56Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH2.641e-1252.78Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_SPIOL4.982e-1156.16Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12A08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A08-B16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671595 ID=CX671595; Name=CX671595; organism=Citrus sinensis; type=EST; length=823bp
CTAGCAAGTAACCCACAAGTGGTAGGGAGCAAGATGGCAGCCTCGTTACA
AGCCGCAGCTACACTGATGCAACCCACCAAGGTGGGTGTGGTACCCGCTC
GCAGCAGCAGCCTGCAGCTGAGGTCTTCACAGAGCGTTTCGAAGGCTTTT
GGTGTCGACTCAGCTGGTGCTAGGATCTCTTGCTCTTTGAATAATGACTT
GAAGGATTTGGCTCAGAAATGTGTTGATGCTACCAAGATCGCTGGCTTTG
CCCTCGCCACTTCTGCTCTCGTCGTTTCGGTCTGTCTGTCATCTCTTCCT
ATGTTTTCCTTTTGCTTCTATTTACTACTATCGATTATTATTTTTTTAGT
ACATATGTGACAGCATAATGATTTTGTAACATGTGTTGTATTATTTCTTG
GTATGTTTAGTTTCGATTTTCACTTATCAACGCAAAAGTGTACTAAATCC
CCCTAGTCATTAATTTATCCCCATCATGTTGTTCTGTTCTGAATTATGCC
GATACACTAGTATAAATATTTGGAGACGGGTTGTGGCTCTTTTCAATTGA
CGGAGAAGGAAACAATTATTAGGCGCCAATAAATGTTCTCTCACTCTCAG
AGTTTAGGCCGTCAACAGACCAAATTTCAATTTTAATTTGTTATAATTGC
TGTTACTATAACTAAATCATTGAAGAATTAGTTTTAAGATAGTGAAAATG
TTGTTGGGAAAGGACTTTATGATCTGACATTGTTGAATAATTGCTTGTTT
CCTCAGGGAGCAAGTGCTGAAGGTGTTCCAAAGAGGCTAACCTATGATGA
AATCCAGAGCAAGACATACATGG
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