CX671591

Overview
NameCX671591
Unique NameCX671591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5071 contig Csv1_Contig5071:1..638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671591 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.667e-34
Identity = 75/125 (60.00%), Postives = 84/125 (67.20%), Query Frame = 2
Query:  254 RFGKGVSSRDDGYAXXXXXXXXXXXXXXDYLDHEIAQLTKLRSQPHEFLSRTAPGKLRLPVSTVKMLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSHFSNDGSFFCAASQ 628
            RFGK  S+ D G A              +  DHEIAQLTK RS+PH+ LS+  PGK RL VST+KMLVGRE N+SGRGRFS+AD CHVLSRYLP+NGPW VD   S  Y S FSNDG FF A  Q
Sbjct:    6 RFGKDNSACDSGNAVEGSGSSKGPNEVSNDFDHEIAQLTKHRSRPHQLLSQDMPGKSRLLVSTMKMLVGRESNHSGRGRFSSADGCHVLSRYLPINGPWGVDQSTSPAYVSQFSNDGLFFVAGFQ 130          
BLAST of CX671591 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.187e-28
Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 2
Query:  344 LDHEIAQLTKLRSQPHEFLSRTAPGKLRLPVSTVKMLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSHFSNDGSFFCAASQ 628
            LDHEIAQLT+LRS PHE LSR    K  LP+ST+KML GRE N SGRGRFS+AD CHV+SR+LPVN P  VD M SRVY S FS DGS F A  Q
Sbjct:   37 LDHEIAQLTRLRSAPHENLSRDLLVKRVLPLSTMKMLAGREANVSGRGRFSSADCCHVVSRHLPVNDPCVVDQMTSRVYLSQFSTDGSLFIAGFQ 131          
The following BLAST results are available for this feature:
BLAST of CX671591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LE14B_PRUAR2.667e-3460.00LEC14B homolog OS=Prunus armeniaca PE=2 SV=1[more]
LE14B_LITER2.187e-2868.42LEC14B protein OS=Lithospermum erythrorhizon PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12A05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A05-B10-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671591 ID=CX671591; Name=CX671591; organism=Citrus sinensis; type=EST; length=638bp
GTCACTCGTGGCGTCACCACGACGGATGAAACATCTTCTGTCCGCGCGTG
ATTACACTTGATTCACCCCCCCTCAATACGTGTCGCTCGCTCTTCCAACA
AAACTGCTCGTTAACTGCAATTCAGCAATTTGTCTCTTCGATGAGCATTA
AACAAAACAATCGACTGCACAGGTTCCGGTAAACTCTGATTCAAGGTTAG
CTAATTTATAGTTGATGTTCATAGAATCTTCATAACTGATATCCAATATG
GGGAGGTTTGGCAAGGGTGTTAGTTCTCGTGACGATGGATATGCCTCTAG
TAGTGGTTCTTTGAGTCAAGGAGGCAACGGGCAATCTGATTATCTTGATC
ATGAAATTGCTCAACTCACAAAGCTTAGGTCGCAGCCCCATGAATTCTTA
AGTAGGACTGCCCCTGGAAAGTTGAGATTGCCAGTTTCAACTGTGAAAAT
GTTGGTTGGTAGGGAAGTCAATTATTCGGGTAGGGGTAGATTCTCGGCAG
CGGATAGTTGTCATGTTTTAAGCCGGTATTTGCCCGTTAATGGTCCTTGG
AAGGTAGATGGGATGAATTCTCGCGTCTACACTTCGCATTTCTCTAATGA
CGGTTCCTTTTTTTGTGCTGCATCTCAGGAAAGCAACA
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