CX671588

Overview
NameCX671588
Unique NameCX671588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671588 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSJ (Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.124e-36
Identity = 85/224 (37.95%), Postives = 134/224 (59.82%), Query Frame = -3
Query:  314 IVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLY--SGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD----DKTLPICWRGPFK--ALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 952
            ++SQL+  G+I ++V+GHCI   G G LF GD +VP+SGV WTPM   + + K+Y  G   L +  + K+     + +IFDSGA+Y YF ++ YQ  +S +++  + +  K   +    D+ L +CW+G  K   + +V + F+ L+L F +      L +PPE YL+IS   +VCLGIL+GS+    +   N+IG I M D+MVIYD+E+  +GW    C+ +
Sbjct:  180 LLSQLKSQGVITKHVLGHCISSKGGGFLFFGDAQVPTSGVTWTPM---NREHKYYSPGHGTLHFDSNSKAISAAPMAVIFDSGATYTYFAAQPYQATLS-VVKSTLNSECKFLTEVTEKDRALTVCWKGKDKIVTIDEVKKCFRSLSLEFADGDKKATLEIPPEHYLIISQEGHVCLGILDGSKEHLSLAGTNLIGGITMLDQMVIYDSERSLLGWVNYQCDRI 399          
BLAST of CX671588 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSI (Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.519e-36
Identity = 83/224 (37.05%), Postives = 130/224 (58.04%), Query Frame = -3
Query:  314 IVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYI--LGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD----DKTLPICWRG--PFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 952
            ++SQL+  G+I ++V+GHCI   G+G LF GD KVP+SGV W+PM   + + KHY    G  +   + K      + +IFDSGA+Y YF  + Y   +S +++  +    K   +    D+ L +CW+G    + + +V + F+ L+L F +      L +PPE YL+IS   +VCLGIL+GS+    +   N+IG I M D+MVIYD+E+  +GW    C+ +
Sbjct:  180 LLSQLKSQGVITKHVLGHCISSKGKGFLFFGDAKVPTSGVTWSPM---NREHKHYSPRQGTLQFNSNSKPISAAPMEVIFDSGATYTYFALQPYHATLS-VVKSTLSKECKFLTEVKEKDRALTVCWKGKDKIRTIDEVKKCFRSLSLKFADGDKKATLEIPPEHYLIISQEGHVCLGILDGSKEHPSLAGTNLIGGITMLDQMVIYDSERSLLGWVNYQCDRI 399          
BLAST of CX671588 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 62/223 (27.80%), Postives = 101/223 (45.29%), Query Frame = -3
Query:  305 IVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-----KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNG--SEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL 952
            ++SQL   G  + V  HC+  N +G      G V S  V  TPM+ N       ++G   +   G S  L     ++   I DSG + AYF   +Y  ++  I   L   P+KL   ++T        F     V E F P++  F    +SV+L V P  YL     +  C G   G  +  E  E  ++G++ + +K+V+YD + + IGW   +C++ + +
Sbjct:  225 VLSQLAATGDAKRVFSHCL-DNVKGGGIFAVGVVDSPKVKTTPMVPNQMHYNVMLMG---MDVDGTSLDLPRSIVRNGGTIVDSGTTLAYFPKVLYDSLIETI---LARQPVKLHIVEETFQC-----FSFSTNVDEAFPPVSFEF---EDSVKLTVYPHDYLFTLEEELYCFGWQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGWADHNCSSSIKI 432          
The following BLAST results are available for this feature:
BLAST of CX671588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP1_ORYSJ1.124e-3637.95Aspartic proteinase Asp1 OS=Oryza sativa subsp. ja... [more]
ASP1_ORYSI9.519e-3637.05Aspartic proteinase Asp1 OS=Oryza sativa subsp. in... [more]
ASPL2_ARATH1.931e-1227.80Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12A04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A04-B8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671588 ID=CX671588; Name=CX671588; organism=Citrus sinensis; type=EST; length=954bp
TTTTTTTACGGTCCCAAAAATTCACATTTAAGGCAAATTTTAAGTTTAAA
TTCAATATAATAACAATATACCTCGAGGTACCTTTTGGTTACGAAAATTA
TTACGGGAAAATAAACATGTATATAATCTTTATTCATAATTACTATATGC
CCATTACACATTTTCTGCCTTTTAGCTAAAAAACAGAAAAATGAACTCGC
TGTGTATCTTCGGCTAAGCAAAAATAATGCATCAGCTGTAATTTAATTGC
TGAAGCCATTTTTGCCTTAACTTTATGCTTTTGTTTGGCTCAAATAAAAT
GATTCAGGGACAAAAGCGTATTGCAATCTTCAGGTTTCCAGCCAATCCGC
TGCTTCTCATTATCATAAATCACCATTTTGTCTTGCATAAAAATTTCTCC
AATTATGTTGTTTTCTCCAACTTCTGCTTCAGAGCCATTCAAAATCCCCA
AGCACACGTTTTTACGACCGCTAATAACAAGATAAGCCTCAGGCGGTACA
ACCAGCCGAACACTATTCCTTCGATTGGTAAAGCTCAGCGCCAAGGGTTT
GAAGTATTCTGTGACTTGACCAAGGGCTTTGAAAGGGCCTCTCCAGCAAA
TTGGAAGTGTTTTATCATCTGGTGCAAGTTTCAGCGGTGTCCCGATTAAA
TCTCTCATTATCAGAGAAACTATTTCTTGGTAAACTCTGCTTGTGAAATA
AGCATAGGAGGCACCGCTGTCGAAAATGAGTGTAAGGTCTTTTAGACCAC
AAGACTTGCCAGAATATAAAAGCTCAGCTGGTCCCAGTATGTAGTGTTTA
AGATCCGCGGAATTTTGCAGCATCGGTGTCCAGGCAACCCCTGAAGAAGG
GACTTTACCATCTCCCAGGAACAAAACCCCGCGTCCGTTTTGGCCTATGC
AGTGGCCTATCACATTTCTTATTAGCCCGTATTCTCGCAGCTGTGACACT
ATGC
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