CX671587

Overview
NameCX671587
Unique NameCX671587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671587_ssr202 microsatellite CX671587_ssr202:202..213. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7604 contig Csv1_Contig7604:85..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 6.616e-71
Identity = 121/148 (81.76%), Postives = 139/148 (93.92%), Query Frame = 1
Query:  139 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ +YH YTILW+H HIVFYVDDVPIR YKN
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKN 178          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.168e-67
Identity = 116/148 (78.38%), Postives = 135/148 (91.22%), Query Frame = 1
Query:  139 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGDREQRVNLWFDP+ ++H Y I WNH  IVFYVD+VPIRVYKN
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKN 177          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.214e-48
Identity = 85/144 (59.03%), Postives = 110/144 (76.39%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN   IV +VDDVPIR +KN
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKN 174          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.214e-48
Identity = 90/144 (62.50%), Postives = 109/144 (75.69%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVFYVDD PIRV+KN
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKN 173          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.290e-47
Identity = 88/144 (61.11%), Postives = 108/144 (75.00%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y+ILWN + IVF+VD+VPIRV+KN
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKN 175          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.290e-47
Identity = 85/144 (59.03%), Postives = 110/144 (76.39%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G+REQR+NLWFDP+ +YH Y++LWN + IVF+VDDVPIRV+KN
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKN 174          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47
Identity = 84/144 (58.33%), Postives = 109/144 (75.69%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  +YH Y++LWN + I F+VDD PIRV+KN
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKN 174          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 5.101e-47
Identity = 81/145 (55.86%), Postives = 110/145 (75.86%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP A++H Y++LWN HHIVF VDD+P+R +KN
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKN 172          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.701e-47
Identity = 82/144 (56.94%), Postives = 110/144 (76.39%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR+ LWFDP   YH Y++LWN + IV +VDDVPIR +KN
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKN 175          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.366e-46
Identity = 85/147 (57.82%), Postives = 106/147 (72.11%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  +YH Y+ILWN+H +VF+VD VPIRVYKN
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKN 170          
The following BLAST results are available for this feature:
BLAST of CX671587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH6_ARATH6.616e-7181.76Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.168e-6778.38Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.214e-4859.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.214e-4862.50Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN2.290e-4761.11Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH2.290e-4759.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.906e-4758.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH5.101e-4755.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC8.701e-4756.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH7.366e-4657.82Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A02-B4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671587 ID=CX671587; Name=CX671587; organism=Citrus sinensis; type=EST; length=582bp
AATTAAAGTTCTCTTTCTAATTAGTAACAGATAATATTTTATTGTACGGC
TTGTTTTACAGCTATGGCTATCCTAAGAAATGCAATAGCATTATTTGTGT
TGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGGGCGACCGGCTACT
TTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCCATCTCAGGCAAAT
CGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAATTCAGGATGTG
GGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATC
AAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAA
TTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAA
ACCGAACGGGTCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGA
AAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAAA
TTATCACCTTTACACTATTCTCTGGAACCATCACCATATTGTCTTCTATG
TGGATGATGTGCCCATCAGGGTTTACAAAAAC
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