CX671584

Overview
NameCX671584
Unique NameCX671584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:658..1462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 1.708e-117
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
Sbjct:  382 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 2.466e-116
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITD+IHPAGWHEWDGNFALNTLFYGEHQN+GAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
Sbjct:  382 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 2.241e-101
Identity = 175/203 (86.21%), Postives = 186/203 (91.63%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            L VG+DLSAFY CDMLAYQDTLYVHSNRQFFV CL+AGTVDFIFGN AAV Q+CDIHAR+P SGQKNMVTAQGR DPNQNTGIVIQK RIGATSDL+PVQ SFPTYLGRPWKEYSRTVIMQSSITDVI PAGWHEW+GNFAL+TLFYGE+ N GAGA TSGRVKWKG +VITS+TEAQA+TPG FIAG SWL STGFPFSLGL
Sbjct:  381 LCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.112e-100
Identity = 172/203 (84.73%), Postives = 188/203 (92.61%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LRVG+DLSAFY CD+LAYQD+LYVHSNRQFF+NC IAGTVDFIFGNAA VLQ+CDIHAR+P SGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDL+PVQ SFPTYLGRPWKEYSRTV+MQSSIT+VI+PAGW  WDGNFAL+TL+YGE+QN GAGA TSGRV WKGF+VITS+TEAQ FTPGSFIAG SWL +T FPFSLGL
Sbjct:  117 LRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 349.747 bits (896), Expect = 1.077e-95
Identity = 165/203 (81.28%), Postives = 179/203 (88.18%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LRVG+D SAFYNCDMLAYQDTLYVHSNRQFFV CLIAGTVDFIFGNAA VLQ+CDIHAR+PNSGQKNMVTAQGR DPNQNTGIVIQK RIGATSDL+ V+GSFPTYLGRPWKEYS+TVIMQS+I+DVI P GW EW G FALNTL Y E+ N GAGAGT+ RVKW+GF+VIT+A EAQ +T G FI G  WL STGFPFSLGL
Sbjct:  390 LRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 335.495 bits (859), Expect = 2.102e-91
Identity = 159/203 (78.33%), Postives = 173/203 (85.22%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LRVG+D SAFY CDM AYQDTLYVHSNRQFFV C I GTVDFIFGNAAAVLQ+CDI+AR+PNSGQKNMVTAQGR+DPNQNTGIVIQ  RIG TSDL  V+G+FPTYLGRPWKEYSRTVIMQS I+DVI P GWHEW G+FAL+TL Y E+ N G GAGT+ RVKWKG++VITS TEAQ FT G FI G  WL STGFPFSL L
Sbjct:  385 LRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 5.203e-74
Identity = 134/203 (66.01%), Postives = 159/203 (78.33%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LR G+DLS FY C   AYQDTLYVHSNRQF+ +C + GTVDFIFGNAAAVLQNC+I AR+P S + N +TAQGR+DPNQNTGI+I  SR+ A SDL+PV GS  TYLGRPW++YSRTV M++S+  +I P GW EWDGNFAL TLFY E QN G GA TSGRV W GFRV+ SA+EA  FT G+F+AG SW+ S+  PF+ GL
Sbjct:  311 LRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS-KTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.774e-70
Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LR G+DLS FY C    YQDTLYVHS RQF+  C I GTVDFIFGNAA VLQNC+I ARKP + + N +TAQGR DPNQ+TGI+I   R+ A SDLKPVQ S  T+LGRPWK+YSRTV +++ +  +I+PAGW EW G+FALNTL+Y E+ N G G+ T+ RVKW+G+ V+TS ++   FT G+FIAG+SWL +T  PF+ GL
Sbjct:  309 LRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPN-RTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.571e-68
Identity = 122/203 (60.10%), Postives = 145/203 (71.43%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LR GAD SAFY C  + YQDTLYVHS RQF+  C + GT+DFIFGNAAAVLQ C+++ARKPN  QKN+ TAQGR DPNQNTGI I   ++ A +DL PV  SF TYLGRPWKEYSRTV + S +  +I PAGW EW G+FAL TL+Y E++N G G+ T+ RV W G+ V T+ TE   FT G+FI GS WL S   P  L L
Sbjct:  118 LRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNIPVYLNL 320
[Close]
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.621e-67
Identity = 123/203 (60.59%), Postives = 150/203 (73.89%), Query Frame = -1 
Query:  197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805
            LR+GAD +    C + AYQDTLY H+ RQF+ +  I GTVDFIFGNAA V QNC++  RK   GQ+N +TAQGR DPNQNTG  IQ   I A++DL+PV+ +F +YLGRPWKEYSRTV+M+S I+DVI PAGW EWD +FAL TLFYGE++N G G+GTS RVKW G+ VITS   A+ FT    I G SWLGSTG  ++ GL
Sbjct:  341 LRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543
The following BLAST results are available for this feature:
BLAST of CX671584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME3_CITSI1.708e-117100.00Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI2.466e-11698.52Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC2.241e-10186.21Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME_DAUCA1.112e-10084.73Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME3_ARATH1.077e-9581.28Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH2.102e-9178.33Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME17_ARATH5.203e-7466.01Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME2_CITSI7.774e-7060.59Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME_ACTDE5.571e-6860.10Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME1_FICAW1.621e-6760.59Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11H12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11H12-P23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671584 ID=CX671584; Name=CX671584; organism=Citrus sinensis; type=EST; length=805bp
TTTTTTTTTTAATTTAAAGAAGCCGGAAATTATTATTCTTCCCATGCTAT
TTTATTTCTTGTTAATCACACAATAGTATTTGTGAAATCGAAGCCACGAA
TAAGACACGCTCAATCAAATATTACAAATTGAAAGACCAGAGACCTATGG
ATCCACTAATACAAAACATATTAATTAAAACTCCTAGTGAATATTACAAA
CCAAGGGAGAATGGGAAACCAGTGGAGCCCAGCCAGCTACTACCAGCAAT
GAAGCTTCCAGGAGTAAAAGCTTGAGCCTCGGTAGCACTTGTAATAACCC
TAAATCCCTTCCATTTCACTCTCCCTGAAGTTCCGGCACCGGCTCCGGCG
TTCTGATGCTCTCCGTAAAACAATGTGTTCAACGCGAAGTTACCATCCCA
CTCGTGCCACCCGGCAGGGTGGATCACGTCAGTAATCGATGACTGCATGA
TCACCGTCCTCGAGTACTCCTTCCAGGGCCTGCCGAGGTACGTCGGGAAA
CTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAATCCTAGATTTTTG
AATGACAATGCCGGTGTTTTGGTTAGGGTCAGCCCTGCCTTGGGCTGTGA
CCATATTTTTTTGGCCGGAATTGGGCTTTCGTGCATGGATGTCACAATTT
TGTAACACGGCTGCAGCGTTACCAAAAATAAAATCAACCGTGCCAGCAAT
TAAGCAGTTCACAAAGAACTGGCGGTTCGAGTGGACGTAGAGTGTGTCTT
GGTAAGCTAACATATCGCAATTGTAAAATGCTGAAAGGTCAGCTCCCACT
CGTAG
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