CX671576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.094e-37 Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = -2 Query: 383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNA-NISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841 ICS K+A+DML+HIT+QHG+LFK + IP SQALSLL RDLREAHLQVLLGG G+RS+N+ N +N + DP LSS L+FP+S+ EE SK ++ +D S P W +S D SL+ EERE++ +Q + RA+FVQDLLL+TL D Sbjct: 75 ICSDKIAKDMLNHITVQHGYLFKNRRRLRRF--VIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.293e-34 Identity = 80/154 (51.95%), Postives = 107/154 (69.48%), Query Frame = -2 Query: 383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISK-SVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841 +CS ++++D+L HITLQH +LF+LQ RVA+PS+ ALSL GRDL+E +L+VLLG S RSS N +++ TD LSSL+LN SSEAE+ +K S + E+ K P+ WK S D +LS EERE+R R+ A R+SFVQ LL+STL D Sbjct: 93 VCSARISKDLLDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSS-RSSGTNAASSVTDSLLSSLVLNLSSSEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLLVSTLFDD 245
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.295e-30 Identity = 77/154 (50.00%), Postives = 97/154 (62.99%), Query Frame = -2 Query: 383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSG-YRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841 IC K+ RDML+HIT+QHG+LFK R IP SQALSLL RDLR+A LQ LLGG R SN +N + DP LSS L F + ++EE SK+ V +DTS P W++ D SL+ EERE++ +Q RA+FVQ L+LSTL D Sbjct: 95 ICFEKITRDMLNHITMQHGYLFK--SGRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGLVLSTLFED 246
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18 Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = -2 Query: 383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841 IC+ +V D++ H+T+QHG FK+Q +++ S LSLL +DLR+ LQ LGGS Y S N AA DPFLSSLI + P +E + S S+++ + P +PSLS +++++R A R+ FV+ L+LST+ D Sbjct: 87 ICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVS---NPPAAAPDPFLSSLICSLPVAEPSKDLHS--DSSDNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLVLSTIFED 230
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = -2 Query: 383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841 +C+ +V D++ HIT QH + FK+Q R S+ L ++LREA+LQ LLGGS +S+ NI +DP LSS + N PS + + + + K + + + + LS E++EK A ++ FV+ LLLST+L D Sbjct: 80 VCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYL--ALKKELREANLQSLLGGSSSFTSSTNID---SDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQEK-----AKKSEFVRGLLLSTMLED 222
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12 Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = -2 Query: 383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841 +C+V+V DM++HITLQH ++FK+ R S LS+L R+ + + Q L GGS S+++ SN A DP LSS I P ++ ++S +++ K+ + + SLS E+ +++++ R+ FV++LL ST+L D Sbjct: 77 VCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFI--SPIADGFFTTESCISAETGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLK----RSEFVRELLSSTILDD 221 The following BLAST results are available for this feature:
BLAST of CX671576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671576 ID=CX671576; Name=CX671576; organism=Citrus sinensis; type=EST; length=842bpback to top |