CX671576

Overview
NameCX671576
Unique NameCX671576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8449 contig Csv1_Contig8449:534..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.094e-37
Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = -2
Query:  383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNA-NISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841
            ICS K+A+DML+HIT+QHG+LFK +         IP SQALSLL RDLREAHLQVLLGG G+RS+N+ N +N + DP LSS  L+FP+S+ EE SK  ++  +D S     P   W +S D SL+ EERE++ +Q + RA+FVQDLLL+TL  D
Sbjct:   75 ICSDKIAKDMLNHITVQHGYLFKNRRRLRRF--VIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226          
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.293e-34
Identity = 80/154 (51.95%), Postives = 107/154 (69.48%), Query Frame = -2
Query:  383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISK-SVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841
            +CS ++++D+L HITLQH +LF+LQ      RVA+PS+ ALSL GRDL+E +L+VLLG S  RSS  N +++ TD  LSSL+LN  SSEAE+ +K S +   E+   K   P+  WK S D +LS EERE+R R+ A R+SFVQ LL+STL  D
Sbjct:   93 VCSARISKDLLDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSS-RSSGTNAASSVTDSLLSSLVLNLSSSEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLLVSTLFDD 245          
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.295e-30
Identity = 77/154 (50.00%), Postives = 97/154 (62.99%), Query Frame = -2
Query:  383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSG-YRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841
            IC  K+ RDML+HIT+QHG+LFK        R  IP SQALSLL RDLR+A LQ LLGG    R SN   +N + DP LSS  L F + ++EE SK+ V   +DTS     P   W++  D SL+ EERE++ +Q   RA+FVQ L+LSTL  D
Sbjct:   95 ICFEKITRDMLNHITMQHGYLFK--SGRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGLVLSTLFED 246          
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = -2
Query:  383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841
            IC+ +V  D++ H+T+QHG  FK+Q      +++  S   LSLL +DLR+  LQ  LGGS Y S   N   AA DPFLSSLI + P +E  +   S   S+++    +  P        +PSLS +++++R    A R+ FV+ L+LST+  D
Sbjct:   87 ICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVS---NPPAAAPDPFLSSLICSLPVAEPSKDLHS--DSSDNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLVLSTIFED 230          
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = -2
Query:  383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841
            +C+ +V  D++ HIT QH + FK+Q      R    S+     L ++LREA+LQ LLGGS   +S+ NI    +DP LSS + N PS        +   +  + + K +    + +   +  LS E++EK     A ++ FV+ LLLST+L D
Sbjct:   80 VCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYL--ALKKELREANLQSLLGGSSSFTSSTNID---SDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQEK-----AKKSEFVRGLLLSTMLED 222          
BLAST of CX671576 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = -2
Query:  383 ICSVKVARDMLSHITLQHGHLFKLQXXXXXXRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 841
            +C+V+V  DM++HITLQH ++FK+       R    S   LS+L R+  + + Q L GGS    S+++ SN A DP LSS I   P ++    ++S +++      K+       + +   SLS E+ +++++    R+ FV++LL ST+L D
Sbjct:   77 VCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFI--SPIADGFFTTESCISAETGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLK----RSEFVRELLSSTILDD 221          
The following BLAST results are available for this feature:
BLAST of CX671576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DI191_ORYSJ1.094e-3754.55Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa sub... [more]
DI194_ORYSJ3.293e-3451.95Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza ... [more]
DI193_ORYSJ1.295e-3050.00Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza ... [more]
DI192_ORYSJ9.627e-1837.91Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza ... [more]
DI194_ARATH5.467e-1333.99Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabid... [more]
DI193_ARATH1.218e-1232.68Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_11H06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11H06-P11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671576 ID=CX671576; Name=CX671576; organism=Citrus sinensis; type=EST; length=842bp
AACACGAAATGGCACTAGAGTTTCCTCAACTAGTCCTCTTCACTCTTACA
TCAACAACATGCAATATGCTGTCAATTTGGATATTTTATATGAATTACGA
ACCATACCGAAGGGAGCATTTCATGTCCACTTCTGCAGATACAAGCATGA
GCTCAAACCTTGAAATGATGATATGCTGGAAAATTGCATAAACAATTGTA
GCAATTCAACCACTCGCCATAATTAAAGTTTTCATTTTTCAATAAATTGG
AAGACTATTGTTTATCCAGAAATGCAGTACATCTGGAGATGAGAAGCAGC
TGAGGATTGGGCCATTATCACGAAGCACCAACTCTTCTGCCGGTTCCACA
TCAAAATAAGGAATTGATTGGCGTCTCCATTAGTCAATCAACAGAGTTGA
CAGAAGTAGATCTTGCACAAAACTGGCTCTCCCAGCACCTTGCCTAATCC
TTTTTTCCCGCTCTTCATGACTCAAAGAAGGATCAAAACTTGTTTTCCAC
ATATGTGTTGGTGCAGCACTTTTTGCACTAGTATCTTCAGTACTGGTTAC
AACAGATTTTGAAATTTCCTCAGCTTCTGATGAAGGAAAATTCAAAATAA
GAGAAGAAAGAAAAGGATCGGTAGCTGCATTAGAGATGTTAGCATTGCTA
GACCGATATCCACTACCCCCTAAAAGCACTTGCAGATGAGCTTCACGAAG
ATCCCGGCCCAGGAGAGAGAGTGCTTGACTGCTAGGAATTGCAACTCTAC
GTAATCTGCGACGTCTCTGCAACTTGAACAAGTGTCCATGCTGCAAAGTA
ATATGACTTAACATGTCCCGTGCAACTTTAACTGAGCAAATG
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