CX671566

Overview
NameCX671566
Unique NameCX671566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11388 contig Csv1_Contig11388:11..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.123e-44
Identity = 89/209 (42.58%), Postives = 129/209 (61.72%), Query Frame = 1
Query:  163 VRTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINI 789
            +R IPG YG P +GPI DRLDYF+ QG E FF+ R++K+KSTV+R N+PP    F+  NP VI +LD KSF  LFDM  VEKK++  G +MPS + TGG R+ +YLD SEP H +LK    + +K      + E  SS   L + VE +L+ K   ++  P ++  FNFLS++  G  P  D  + ++  S++ KW+   + P +S+ +
Sbjct:   72 IRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPG--PFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSFTDLCEVVEYDLATKGKAAFNDPAEQAAFNFLSRAFFGVKP-IDTPLGKDAPSLISKWVLFNLAPILSVGL 277          
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44
Identity = 91/209 (43.54%), Postives = 130/209 (62.20%), Query Frame = 1
Query:  163 VRTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINI 789
            +R IPG+YG P++GPI DR DYF+ QG E FF+ RI K+ STV+R N+PP    F+  NP V+A+LD KSF  LFD++ VEKK++  G +MPS + TGG R+ +YLD SEPKH +LK      LK S      E  ++   LFD++EKELS K    +        FNFL+++  G +P AD ++  +   ++ KW+   + P +SI +
Sbjct:   54 IRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPG--AFIAENPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNP-ADTKLKADAPGLITKWVLFNLHPLLSIGL 259          
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.051e-39
Identity = 82/210 (39.05%), Postives = 130/210 (61.90%), Query Frame = 1
Query:  163 VRTIPGSYGWPLLGPISDRLDYFWFQGP-ETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINI 789
            +R IPGSYG P   PI DRL+YF+  G  + +FR R++K++STVFR N+PP    F++ NP VI +LD KSF  LFD+  VEKK++  G +MPS K TGG RV +YLD SEP+HAQLK      LK SS   + +  ++   LF+ +E EL++    ++    ++  F FL ++   ++P+ + ++  +  +++  W+   + PT+ + +
Sbjct:    8 LREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPG--PFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPE-ETKLGTSAPTLISSWVLFNLAPTLDLGL 214          
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.296e-36
Identity = 79/209 (37.80%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  166 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCV-FNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINI 789
            R +PGSYG P +  + DRLD+++ QG + +F  R E++ STV R N+PP    F+  +P V+A+LD KSF  LFD+  VEK+++  G FMPS   TGG RV AYLD SEP HA++K   +  L      +V    S+   L DTVE +L+     S    L     F F+ ++  G  P A + +   G +    WL  Q+ P  ++ +
Sbjct:   10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPG--PFMARDPRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGKSDFTALNDATSFEFIGEAYFGVRPSASSSLGTGGPTKAALWLLWQLAPLTTLGL 216          
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.197e-32
Identity = 76/210 (36.19%), Postives = 115/210 (54.76%), Query Frame = 1
Query:  163 VRTIPGSYGWPLLGPISDRLDYFWFQGP-ETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINI 789
            +R +PG YG P++G I DR +YF+  G  + FF  R+  H+STV R N+PP    F+  +P V+A+LD  SF  LFD  +V+K ++  G FMPS   TGG RV +YLD SEP HA LK      L    +  + +       LF  +E +L+      + V      F FL + ++G DP A + +  +G  ++ KW+  Q+ P +S+ +
Sbjct:   47 LRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPG--PFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDP-AKSALGRDGPKLITKWVLFQLSPLLSLGL 253          
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.128e-28
Identity = 72/207 (34.78%), Postives = 111/207 (53.62%), Query Frame = 1
Query:  163 VRTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHK-STVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVS 780
            +R IPG YG P L P+ DRLDY++FQG + FFR R+ +H  +TV R N+PP    FL  +P V+A+LD +SF  L D  +V+K + L G FMPS+   GG R  A+LD ++P+HA++K   M               ++   +FD V+  L     + +     + + +F   ++ G  P + A + +   +   KWL  Q+ P  S
Sbjct:   29 IREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNMPPG--PFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAGGPVEFNKLNMRYMLDFTCAALFGGAPPSKA-MGDAAVTKAVKWLIFQLHPLAS 232          
BLAST of CX671566 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.925e-28
Identity = 71/207 (34.30%), Postives = 111/207 (53.62%), Query Frame = 1
Query:  163 VRTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHK-STVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVS 780
            +R IPG YG P   P+ DRLDYF+FQG E +FR R+ +H  +TV R N+PP    F++ NP V+A+LD +SF  L D  +V+K + L G +MPS    GG R  A+LD ++P+HA++K   M               ++   +FD VE  L    ++ +     + + +F   ++ G +P +   + +   +    WLA Q+ P  S
Sbjct:   29 IREIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPG--PFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDAVEAGLGA--AVEFNKLNMRYMLDFTCAALFGGEPPSKV-VGDGAVTKAMAWLAFQLHPIAS 230          
The following BLAST results are available for this feature:
BLAST of CX671566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CP74_LINUS1.123e-4442.58Allene oxide synthase, chloroplastic OS=Linum usit... [more]
CP74A_ARATH3.268e-4443.54Allene oxide synthase, chloroplastic OS=Arabidopsi... [more]
C74A2_PARAR7.051e-3939.05Allene oxide synthase OS=Parthenium argentatum GN=... [more]
C74A2_ORYSJ7.296e-3637.80Allene oxide synthase 2 OS=Oryza sativa subsp. jap... [more]
C74A1_ORYSJ2.197e-3236.19Allene oxide synthase 1, chloroplastic OS=Oryza sa... [more]
C74A4_ORYSJ1.128e-2834.78Allene oxide synthase 4 OS=Oryza sativa subsp. jap... [more]
C74A3_ORYSJ1.925e-2834.30Allene oxide synthase 3 OS=Oryza sativa subsp. jap... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_11G12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11G12-N23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671566 ID=CX671566; Name=CX671566; organism=Citrus sinensis; type=EST; length=801bp
CAAAAATATCAGAAGATAACACACCAGTCCAAGCTCAAAATGAATACCTC
CATGATGATGGTAAACTCAATGAGCGTATCACCAGACATGCCCTCATCAT
CGCCCTTCCAGTTACAGTCACTCTCCACACCCACTTCATCACCACCGTCC
ACGTCGCTCCCGGTCCGAACAATCCCCGGATCCTACGGCTGGCCCCTTCT
GGGCCCCATCTCCGACCGCCTCGACTACTTCTGGTTCCAGGGTCCTGAAA
CTTTCTTCAGAAAACGCATTGAAAAGCACAAGAGCACGGTGTTCCGTACA
AACATACCACCCACGTGGCCTTTGTTTCTCAACGTAAACCCCAATGTCAT
TGCCGTTCTTGACTGCAAATCTTTTGCTCATCTCTTTGATATGGAGATTG
TGGAGAAGAAAAATATTCTTGTTGGTGATTTCATGCCCAGTGTTAAGTTT
ACAGGAGGCTTGAGGGTTAGTGCTTATCTTGATACTTCTGAGCCTAAACA
TGCCCAGCTCAAAGGCTTCGCCATGGACACTCTGAAAAGAAGCTCAAAAT
TATGGGTATCAGAAGTGGTATCAAGTCTGGACACACTGTTCGACACCGTC
GAGAAGGAACTCTCCGAAAAGAACAGCATAAGCTACATGGTCCCTTTACA
AAAATGCGTCTTTAACTTCCTCTCAAAATCGATCGTGGGAGCCGACCCAA
AAGCCGACGCCGAAATCGCCGAGAACGGCTTCTCCATGCTCGACAAGTGG
CTGGCCTTGCAGATCCTGCCCACAGTCAGCATAAACATCTTGCAGCCCCT
T
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