CX671563

Overview
NameCX671563
Unique NameCX671563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5065 contig Csv1_Contig5065:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671563 vs. ExPASy Swiss-Prot
Match: Y1934_ARATH (Uncharacterized protein At1g09340, chloroplastic OS=Arabidopsis thaliana GN=At1g09340 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.340e-57
Identity = 109/129 (84.50%), Postives = 122/129 (94.57%), Query Frame = 1
Query:    1 HSQIQYRRKVLQPKVGLQVTASSEKNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDEEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQY 387
            H Q+QY+RKV QPK  L V+ASSEK ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESD++FA+FSSKILHLKGDRKDYDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQY
Sbjct:   30 HLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQY 158          
The following BLAST results are available for this feature:
BLAST of CX671563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1934_ARATH2.340e-5784.50Uncharacterized protein At1g09340, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_11G11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11G11-N21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671563 ID=CX671563; Name=CX671563; organism=Citrus sinensis; type=EST; length=892bp
CACTCTCAAATTCAGTATAGGAGAAAGGTGTTGCAGCCAAAAGTAGGGCT
GCAAGTTACAGCTTCTAGTGAAAAGAACATTCTTATAATGGGAGGAACTC
GATTCATTGGTGTATTTCTTTCAAGACTCCTAGTCAAAGAGGGTCATCAG
GTGACCTTGTTTACTAGGGGAAAGGCACCAATCGCCCAACAATTGCCCGG
TGAATCAGACGAGGAATTCGCCGAATTTTCTTCCAAGATCTTGCATTTGA
AAGGAGACAGAAAGGACTATGATTTTGTGAAATCCAGCCTCTCTGCCAAA
GGCTTTGATGTTGTTTATGATATAAATGGACGAGAGGCAGATGAAGTCGA
ACCCATATTGGATGCACTGCCAAATCTAGAACAGTATGCTGAAGATATTT
ATAGAGTTTAATTAGCTATTTTAAAAGTCATTTCTTTCATTTTAACCCAT
CAGGTCTTTAGTAGGGTTAATAGTTAAACATTTTTTAAGTCTTTTAAATA
AGATGAATTCCAAAATTTGACATGAAGTTCCTTTAATACTATTAAGAATA
CAGATCAAATTGGAATGGGCACAGTTAAATAATAAATTTTGCAGAGGAGA
AGTCCCACTCAGTGTAGATAGGCATGTCAACACTGATGGTGAGCAAAAAG
TGAAATAGCTTGCTTGATTTAGTTGAATAGATAATTAAATAATAACATGG
ATATATTTAGTTGCGTAATGTCTAACAGTACTACATTCCTTAGAGTGAAG
AGGCTGAAAACCTTCATTAGCATGTTAGTAATGAAGTTGGCAGCAAATAA
ATTGAATAGTATGAGCTAACAGGATAGATAATCAGTATTTCCAAGAACCT
TCCGTTTATGCTTTTATATCTAAGCTCACTAACAATCCTTTC
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