CX671558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671558 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.569e-21 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 520 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYL 759 F+RERLNGHYG AFV NT SA P+L +I+ I G I Y + GLH G+ H+ +FVL L+A + +VESLMM +AS+VPN+L Sbjct: 462 FQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFL 541 HSP 2 Score: 53.5286 bits (127), Expect = 2.580e-15 Identity = 25/63 (39.68%), Postives = 33/63 (52.38%), Query Frame = 1 Query: 22 LEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQVR 210 L+ + A FL Q LT RSF+NM RD GYYW R T++ N+GT ++I R Sbjct: 371 LDSGGSQASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILVTVCIGTIYLNVGTSYSAILAR 433 HSP 3 Score: 49.2914 bits (116), Expect = 2.580e-15 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 2 Query: 287 ARGSLLMFVASFLTFMTIGGFPSFVEDMKV 376 ARGS FV F+TFM+IGGFPSFVEDMKV Sbjct: 432 ARGSCASFVFGFVTFMSIGGFPSFVEDMKV 461
BLAST of CX671558 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 520 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYL 759 F +ERL+G+YG + ++ N S+ P+L IS+I G I Y+L G+ H+ +F L +F + ++ESLMM+VAS+VPN+L Sbjct: 440 FYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFL 519 HSP 2 Score: 47.7506 bits (112), Expect = 1.871e-11 Identity = 23/62 (37.10%), Postives = 33/62 (53.23%), Query Frame = 1 Query: 28 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQVRI 213 +K + A + Q LT+RSF+NM RD+GYYW R T+F ++G SI R+ Sbjct: 351 RKGSEATWWKQLRTLTARSFINMCRDVGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARV 412 HSP 3 Score: 41.9726 bits (97), Expect = 1.871e-11 Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 2 Query: 287 ARGSLLMFVASFLTFMTIGGFPSFVEDMKV 376 AR S F+ F+TFM+IGGFPSF+E+MKV Sbjct: 410 ARVSCGGFITGFMTFMSIGGFPSFLEEMKV 439
BLAST of CX671558 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 520 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYL 759 F +ERL+G+YG + ++ N S+ P+L I+LI G+I Y++ G H+ +F L +F + ++ESLMM+VASLVPN+L Sbjct: 441 FYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFL 520 HSP 2 Score: 48.9062 bits (115), Expect = 5.075e-12 Identity = 24/62 (38.71%), Postives = 32/62 (51.61%), Query Frame = 1 Query: 28 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQVRI 213 +K + A + Q LT RSFVNM RD+GYYW R T+F ++G SI R+ Sbjct: 352 RKGSEATWFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARV 413 HSP 3 Score: 42.743 bits (99), Expect = 5.075e-12 Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 2 Query: 287 ARGSLLMFVASFLTFMTIGGFPSFVEDMKV 376 AR S F+ F+TFM+IGGFPSF+E+MKV Sbjct: 411 ARVSCGGFITGFMTFMSIGGFPSFIEEMKV 440
BLAST of CX671558 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 520 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYL 759 F RERLNGHYG + N S+LP++ L+ L +I + G HF Y L L + VES MM++AS+VPN+L Sbjct: 435 FSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFL 514 HSP 2 Score: 49.2914 bits (116), Expect = 3.154e-11 Identity = 21/58 (36.21%), Postives = 33/58 (56.90%), Query Frame = 1 Query: 28 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSI 201 KK + ++ Q +LT RSF+NM RDLGYYW R ++F N+G ++ ++ Sbjct: 346 KKGSQTNWWKQLRILTQRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNV 403 HSP 3 Score: 39.6614 bits (91), Expect = 3.154e-11 Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = 2 Query: 308 FVASFLTFMTIGGFPSFVEDMKV 376 F+A F+TFM+IGGF SF+E+MKV Sbjct: 412 FMAGFMTFMSIGGFQSFIEEMKV 434 The following BLAST results are available for this feature:
BLAST of CX671558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671558 ID=CX671558; Name=CX671558; organism=Citrus sinensis; type=EST; length=760bpback to top |