CX671557

Overview
NameCX671557
Unique NameCX671557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671557_ssr919 microsatellite CX671557_ssr919:919..928. BLAST: Citrus ESTs to Prunus persica proteins V1
CX671557_ssr931 microsatellite CX671557_ssr931:931..944. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5064 contig Csv1_Contig5064:480..1428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.040e-58
Identity = 102/205 (49.76%), Postives = 149/205 (72.68%), Query Frame = -2
Query:  319 IKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMS 918
            +KVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y + GLH G+ H+ +FVL L+A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ YR++F  ++KT E + P V+ +++
Sbjct:  459 MKVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIYRIIFFIMIKTNEDVTPWVRGYIA 663          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.532e-46
Identity = 90/217 (41.47%), Postives = 145/217 (66.82%), Query Frame = -2
Query:  286 IKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 918
            +KVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y+L     G+ H+ +F L +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ YI++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  ++V YRL+F  ++K  E+  P +KA   +  KRT + ++
Sbjct:  437 MKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAILVCYRLLFFVVLKLRERAGPALKA---IQAKRTMRNLD 650          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.722e-45
Identity = 89/217 (41.01%), Postives = 146/217 (67.28%), Query Frame = -2
Query:  286 IKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 918
            +KVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y++     G  H+ +F L +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  ++V YR++F  ++K  E+ +P +KA   +  KRT + ++
Sbjct:  438 MKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKA---IQAKRTMKSLK 651          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.412e-39
Identity = 82/201 (40.80%), Postives = 122/201 (60.70%), Query Frame = -2
Query:  334 IKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVV 918
            +KVF RERLNGHYG   +   N  S+LP++ L+ L   +I   +     G  HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW+DLA++  +++ YR+ F  I+K  EK+ PV+
Sbjct:  432 MKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLAVVMMILIGYRIAFFAILKFREKVFPVI 632          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.760e-25
Identity = 58/185 (31.35%), Postives = 98/185 (52.97%), Query Frame = -2
Query:  379 IKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD----NNLDGEQVLRDNWQLQMG-YSKWVDLAILFGMVVFYRLV 918
            + ++  E  N H GA  F+ G    ++P+L L+S+    + Y + GL   +    YFVL  F C+L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH Y+ +G+ +NE+ G  F      ++ G Q ++ N+Q+     +KW ++ +L  M   YRL+
Sbjct:  489 VAIYRSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRLL 673          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.984e-17
Identity = 50/192 (26.04%), Postives = 107/192 (55.73%), Query Frame = -2
Query:  364 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIV 915
            +V  +E   G Y  ++++  NT + +P+L ++SL+    VY + GL+   Q F++FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F     +P P W + +YY++ ++Y  + M  NE+  ++   F +      + GE VL++    +   ++W+++ I+    VFYR++  GI+
Sbjct:  428 RVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.286e-16
Identity = 60/200 (30.00%), Postives = 97/200 (48.50%), Query Frame = -2
Query:  343 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------------NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIVKTVEKMK 903
            RE  +G Y  ++ +  NT   LPYL +IS+I    VY L GL   +Q F YFVL+++  +L+  S ++ ++SL PNY+TG      +     L  G+F     LP  +W + +Y+ + +KYA   +  NE+  L                 + G  VL+     +    +W ++ +L G  V YR L FL +++ V   K
Sbjct:  393 RETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEK--QRWFNVYVLLGFFVLYRVLCFLALLRRVSGSK 588          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.383e-16
Identity = 60/200 (30.00%), Postives = 98/200 (49.00%), Query Frame = -2
Query:  343 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK------FDNN------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIVKTVEKMK 903
            RE  +G Y  ++ +  NT   LPYL LI++I    +Y L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  +   +     L  G+F     LP  +W + +Y+ + +KYA   +  NE+  L       F+        + G  VL  N   +    +W ++ +L G  V YR L FL ++K V   K
Sbjct:  381 RETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLHER--QRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.057e-15
Identity = 48/179 (26.82%), Postives = 94/179 (52.51%), Query Frame = -2
Query:  379 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLV 915
            ++  RE     Y   ++V  +T   +P+L +IS++    VY L GL +    F YF L+++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ +  NE+ G  F      +Q L+++        KW +L I+   +V YR++
Sbjct:  411 RILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEYRGDVFLK----QQDLKES-------QKWSNLGIMASFIVGYRVL 576          
BLAST of CX671557 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.331e-13
Identity = 48/194 (24.74%), Postives = 101/194 (52.06%), Query Frame = -2
Query:  361 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLD---------GEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVK 915
            ++  +E  +G Y  +++   N    LP+L +++++    VY L GL+  +  F +F LL++  +    S+++  ++LVPN++ G    +G+ G   L  G+F   +++P  +W + ++YI+  KY ++G   NEF   K +  L+          E +L++  +     S+W ++ I+   V+ YR +   I++
Sbjct:  449 EILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIP-GYWIF-MHYISLFKYPFEGFLINEFS--KSNKCLEYGFGKCLVTEEDLLKE--ERYGEESRWRNVVIMLCFVLLYRFISYVILR 636          
The following BLAST results are available for this feature:
BLAST of CX671557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AB11G_ARATH1.040e-5849.76ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH4.532e-4641.47ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH1.722e-4541.01ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH1.412e-3940.80ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH5.760e-2531.35ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB23G_ARATH1.984e-1726.04ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB8G_ARATH1.286e-1630.00ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB4G_ARATH6.383e-1630.00ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB10G_ARATH7.057e-1526.82ABC transporter G family member 10 OS=Arabidopsis ... [more]
AB5G_ARATH1.331e-1324.74ABC transporter G family member 5 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_11G08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11G08-N15-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671557 ID=CX671557; Name=CX671557; organism=Citrus sinensis; type=EST; length=949bp
TTTTTTTCTATAAGCTTATAGAAACTTTATAATTGTAGTCAACAAATAAA
AACTAAAGATAATAAAGAAGCAAATCTTGATCATACAAAAATAAAAGTAG
TTAAAGGATGTTTCAAAGCTAAAATATTCTTTCTAATTACATCATTCCTC
TTCCACTCATGAGAACATAGTTTTTTCACCTACTTCAAGCGATTTTACTA
GCTGAACTAACGAATATCCGAAGTCTTTTGTTCACGATCACTTGTAAAGT
ATTTTGTCTTCTTGTGGAGGTGTAGTATACGGATTTTCCATGATTTGAGT
TGTTCGTTTCATGGGCACAGACATAAAAGCTTTAACCACAGGCTTCATCT
TTTCAACTGTCTTGACGATTCCCAAGAATACAAGTCGATAAAAAACCACC
ATACCAAACAAGATAGCAAGATCAACCCACTTAGAATATCCCATTTGCAG
TTGCCAATTATCTCTCAAAACCTGCTCACCATCTAGATTGTTGTCAAATT
TCAGACCTTCAAACTCGTTCTTGAACATTCCTTGATACGCATATTTGTGG
AAAGCAATATAATATAATGGGTATTTCCAAAATGGATGAGGAAGATCATT
TGGCAATCGAAAAAATCCGCCGCCTAATATCATAAGGCCTTGAATTCCAG
CTCCTGTTATTATGCCCGTCAGATAGTTGGGCACCAAGCTTGCAACGATC
ATCATTAGGCTCTCAACGAGCAACATGCAAGCAAACAATAACAAAACAAA
GTATGTGAAGTGTTGATATCCTTTGTGAAGTCCCGGAAGGTCATACACTA
TCGCTCCAGGAATCAATGAAATGAGAGCTAAGTATGGCAGCGCAGAAAAC
GTGTTGCCAAACACAAACGCAGTAGCACCATAGTGCCCGTTTAGTCTCTC
TCGCTCAAATACCTTTATACACACACACAAACACACACACACACATATA
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