CX671543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671543 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 3.556e-75 Identity = 152/250 (60.80%), Postives = 181/250 (72.40%), Query Frame = 1 Query: 64 LLMFIFPLQLTASMQLQGNNA--THSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATEST---QHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMXXXXXXXXXXXXXXXXXHHHF 798 L +F L +A+ L N + + SGQINSNSVLVALLDS YTEL+ELVEKALLLQ LEDAVG+H+ITIFAP+NEALERDLDPEFKRFLLEPGNLKSLQTLL+ HI+ R+ N+ +E + +HHTL +D V L S+ G K + +++I P+ + RPDG+IHGIERLLIPRSVQ+DFN RR+L+SISAV PEGAPEVDPRTNRLKKP GS PALP+ AM HHF Sbjct: 14 LFLFFSVLIFSAASALSKNQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHF 262
BLAST of CX671543 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.019e-70 Identity = 152/257 (59.14%), Postives = 179/257 (69.65%), Query Frame = 1 Query: 55 SFLLLMFIFPLQLTASMQLQGN-NATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATEST---QHHTLSSDSVELTSH---DSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKK-PTPASKP-GSSPALPVYYAMXXXXXXXXXXXXXXXXXHHHF 798 S + + F F L AS G+ N T SGQINSNSVLVALLDS YTEL+ELVEKALLLQ LEDAVG+H+ITIFAP+NEALERDLDP+FKRFLL+PGNLKSLQTLLL HI+ R+ N+ E++ +H TL D V S +G + ++ + + P+ + RPDG+IHGIERLLIPRSVQ+DFN RRNLRSISAV PEGAPE+DPRTNRLKK T S P GS P LP+ AM H HF Sbjct: 9 SVITIFFSFFFLLNASALESGHHNITGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHF 265
BLAST of CX671543 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.019e-70 Identity = 145/226 (64.16%), Postives = 173/226 (76.55%), Query Frame = 1 Query: 58 FLLLMFIFPLQLTASMQLQGNNATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAM 735 FLLL+F+ TA +N GQINSNSVLVALLDSHYTEL+ELVEKALLLQ LE+AVGKH+ITIFAP+N+ALER+LDP FK FLLEP NLKSLQ+LL+ HI+ RI + + S H TLS+D + LT D + +++I P+ V RPDG+IHGIERLLIPRSVQ+DFN RR+LRSISAV PEGAPEVDPRT+RLKKP+PA G+ P LP+Y AM Sbjct: 10 FLLLLFLTTSIATALP----DNKPVPGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLTV-DVNTLKVDSAEIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVLPIYDAM 230
BLAST of CX671543 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 7.940e-67 Identity = 137/245 (55.92%), Postives = 171/245 (69.80%), Query Frame = 1 Query: 64 LLMFIFPLQLTASMQLQGNNATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMXXXXXXXXXXXXXXXXXHHHF 798 L +F L LT S+ + SGQINSNSVLVALLDSHYTEL+ELVEKALLLQ LE+AVG+H+ITIFAP+N+ALE++LDPEFK FLL+P NLKSLQ+LL+ HI+ RI + ++ H TLS+D + T+ ++ +++ P+ + RPDG+IHGIERLLIPRSVQ+DFN RR+LRSI+AV PEGAPEVDPRT+RLKK G+ P LPVY AM HHF Sbjct: 4 LSKLLFFLLLTISITTALPDKPGSGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFTNGK-----VNSAEITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHF 243 The following BLAST results are available for this feature:
BLAST of CX671543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671543 ID=CX671543; Name=CX671543; organism=Citrus sinensis; type=EST; length=799bpback to top |