CX671541

Overview
NameCX671541
Unique NameCX671541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5062 contig Csv1_Contig5062:1..832. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO_LENCU (Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3)

HSP 1 Score: 259.61 bits (662), Expect = 1.552e-68
Identity = 124/224 (55.36%), Postives = 153/224 (68.30%), Query Frame = 1
Query:  160 KVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLK 831
            +++     H D+IKE+  GKLV+ N+IG+ HDHF  YYLD DIDG  NSFEKT L T R     + RKSY T E +TAKTE +A++ +   P E  +VNPN KT +G+                T+DDYPQIR  FT+YN+WVTPYN++EK++GG YVD S GDDTL   T  NREI NKDIV+W+ +GIHH P QEDFP+MP +S  FELRPTNFFE NPVLK
Sbjct:  430 EIKGTNIKHKDEIKEEIHGKLVSANSIGIYHDHFYIYYLDFDIDGTQNSFEKTSLKTVRIVDGGSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTPYNRTEKWAGGLYVDHSRGDDTLAVWTKKNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLK 653          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO_PEA (Primary amine oxidase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.517e-68
Identity = 124/224 (55.36%), Postives = 153/224 (68.30%), Query Frame = 1
Query:  160 KVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLK 831
            +++     H D+IKED  GKLV+ N+IG+ HDHF  YYLD DIDG  NSFEKT L T R    ++ RKSY T E +TAKTE +A++ +   P E  +VNPN KT +G+                T+DDYPQIR  FT+YN+WVT YN++EK++GG YVD S GDDTL   T  NREI NKDIV+W+ +GIHH P QEDFP+MP +S  FELRPTNFFE NPVLK
Sbjct:  437 EIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLK 660          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO_ARATH (Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.247e-59
Identity = 114/226 (50.44%), Postives = 150/226 (66.37%), Query Frame = 1
Query:  163 VRPVEYTHIDQI--KEDQQGKLVADNTIGVNHDHFLNYYLDLDIDG-YANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDT-KPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            V+   Y ++D +  +ED  G L+++N IGV HDHF+ ++LD+DIDG   NS  K  L  +R     +PRKSY  V+K  AKTE +A++KL    P EF +VNPN+K+++G+                  DD PQIR  FT+  IWVTPYN+SE+Y+GG  + QS GDDTL   +D +R IENKDIVLWYT+G HH PCQED+PVMPTV+  FEL+P NFFE NP+L
Sbjct:  468 VKGTPYDNVDDLGDREDDAGPLISENVIGVVHDHFITFHLDMDIDGPMNNSLVKVHLEKQRVPTGKSPRKSYLKVKKYIAKTEKDAQIKLSLYDPYEFHIVNPNRKSRVGNPAGYRIVPGGNAASLLDHDDPPQIRGAFTNNQIWVTPYNRSEQYAGGVLIYQSQGDDTLQVWSDRDRSIENKDIVLWYTLGFHHVPCQEDYPVMPTVAASFELKPANFFESNPIL 693          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO_ECOLI (Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.595e-23
Identity = 70/222 (31.53%), Postives = 103/222 (46.40%), Query Frame = 1
Query:  184 HIDQIKEDQQ-GKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTD------DDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            H +  K+D + G L+  N +G  H H  N+ LDLD+DG  NS      V + NT A  PR S   V +     E +A  K D   +   + NPNK+ ++G+                        D++   R  F D  +WVT Y+  E++  G Y ++S  D  L Q +  N  ++N D V+W T G  H    E++P+MPT      L+P NFF+  P L
Sbjct:  531 HDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNT-AGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRL-LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPWNFFDETPTL 750          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMOH_ARTGO (Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.172e-21
Identity = 61/194 (31.44%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  250 HDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLD-TKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            H H  +  LD+ IDG AN  E+  LV       N P  +  T ++     E EA    D  K   + + NP+    +GH                 DD     RA F  +++WVT + + E Y+ G++V+Q  G   L      +R+I+ +D+V+W++ G+ H P  ED+P+MP  + GF L+P  FF+ NP L
Sbjct:  451 HQHLFSARLDMMIDGDANRVEELDLVRLPKGPGN-PHGNAFTQKRTLLARESEAVRDADGAKGRVWHISNPDSLNHLGHPVGYTLYPEGNPTLAMADDSSIASRAAFARHHLWVTRHAEEELYAAGDFVNQHPGGAVLPAYVAQDRDIDGQDLVVWHSFGLTHFPRPEDWPIMPVDTTGFTLKPHGFFDENPTL 643          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO_KLEAE (Primary amine oxidase OS=Klebsiella aerogenes GN=maoA PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.410e-21
Identity = 68/222 (30.63%), Postives = 101/222 (45.50%), Query Frame = 1
Query:  184 HIDQIKEDQQ-GKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTD------DDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            H    KED + G L+  N +G  H H  N+ LDLD+DG  N+        + NT A  PR S   V + T  +E +A  K D   +   + N +K+ ++G+                        D++   R  F D  +WVT Y+ +E+Y  G Y ++S  D  L Q    +  + N D V+W T G  H    E++P+MPT      L+P NFF+  P L
Sbjct:  531 HDPSAKEDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNTLVAMDPEVKPNT-AGGPRTSTMQVNQYTIDSEQKAAQKFDPGTIRL-LSNTSKENRMGNPVSYQIIPYAGGTHPAATGAKFAPDEWIYHRLSFMDKQLWVTRYHPTERYPEGKYPNRSAHDTGLGQYAKDDESLTNHDDVVWITTGTTHVARAEEWPIMPTEWALALLKPWNFFDETPTL 750          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO2_ARTS1 (Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.205e-20
Identity = 58/194 (29.90%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  250 HDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHG-DDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            H H  N  +D ++DG  N+  +  +    +    T   ++  V++     +   R   + K   + + N   K  +                   DD Y   RA F   N+WVT Y+++E+++ G Y +Q+ G DD L   T  +R I + D+V+WYT G+HH    ED+PVMP  + GF L P  FF  NP L
Sbjct:  436 HQHMFNVRMDFELDGVKNAVYEVDMEYPEHNPTGT---AFMAVDRLLETEQKAIRKTNEAKHRFWKIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAGEYPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHGFFNQNPTL 626          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO1_ARTS1 (Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.205e-20
Identity = 58/194 (29.90%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  250 HDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHG-DDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            H H  N  +D ++DG  N+  +  +    +    T   ++  V++     +   R   + K   + + N   K  +                   DD Y   RA F   N+WVT Y+++E+++ G Y +Q+ G DD L   T  +R I + D+V+WYT G+HH    ED+PVMP  + GF L P  FF  NP L
Sbjct:  436 HQHMFNVRMDFELDGVKNAVYEVDMEYPEHNPTGT---AFMAVDRLLETEQKAIRKTNEAKHRFWKIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAGEYPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHGFFNQNPTL 626          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: PAOX_ARTGO (Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.020e-19
Identity = 60/195 (30.77%), Postives = 93/195 (47.69%), Query Frame = 1
Query:  250 HDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKT-EFEARLKLDTKP-MEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            H H  +  LD+ IDG+ N  E+  +V +     N    ++    K T  T E EA  + D +    + + NP  K ++                          RA F   ++WVT Y   E+Y  G++V+Q  G   L      +R+I+ +DIV+W+T G+ H P  ED+P+MP  + GF+LRP  FF+ +PVL
Sbjct:  431 HQHIFSARLDMAIDGFTNRVEEEDVVRQTMGPGNERGNAF--SRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVL 623          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO1_ASPNG (Copper amine oxidase 1 OS=Aspergillus niger GN=AO-I PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.599e-18
Identity = 65/219 (29.68%), Postives = 95/219 (43.38%), Query Frame = 1
Query:  184 HIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKETAKTE--FEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIR-AGFTDYNIWVTPYNKSEKYSGGNYVDQSHGD-DTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            +ID  K  + G +V+   +  NH H     +D  IDG  NS +  +           P  ++  V  ET +    F+A  +L+       MVNP+KK  I                   D +  Q R A F  +++WVT Y   E Y+GG Y  QS  + + +         + + D+V+W T GI H P  ED+PVMP       +RP +FF  NP L
Sbjct:  433 NIDAGKVSEYGNVVSGGVLAQNHQHIFCVRIDPAIDGPNNSVQVEESHPVPMNAVTNPNGNFYKVNTETMERAGFFDAAPELNRT---VKMVNPHKKNPISQKPVGYKFIPLATQRLLADPNSIQARRAQFAQHHVWVTKYRDGELYAGGRYTLQSQEEIEGVSDAVKRGDSVVDTDVVVWSTFGITHNPRVEDWPVMPVEIFQLMIRPADFFTANPSL 648          
The following BLAST results are available for this feature:
BLAST of CX671541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AMO_LENCU1.552e-6855.36Primary amine oxidase (Fragment) OS=Lens culinaris... [more]
AMO_PEA4.517e-6855.36Primary amine oxidase OS=Pisum sativum PE=1 SV=1[more]
AMO_ARATH2.247e-5950.44Primary amine oxidase OS=Arabidopsis thaliana GN=A... [more]
AMO_ECOLI2.595e-2331.53Primary amine oxidase OS=Escherichia coli (strain ... [more]
AMOH_ARTGO3.172e-2131.44Histamine oxidase OS=Arthrobacter globiformis PE=1... [more]
AMO_KLEAE5.410e-2130.63Primary amine oxidase OS=Klebsiella aerogenes GN=m... [more]
AMO2_ARTS11.205e-2029.90Copper methylamine oxidase OS=Arthrobacter sp. (st... [more]
AMO1_ARTS11.205e-2029.90Primary amine oxidase OS=Arthrobacter sp. (strain ... [more]
PAOX_ARTGO1.020e-1930.77Phenylethylamine oxidase OS=Arthrobacter globiform... [more]
AMO1_ASPNG5.599e-1829.68Copper amine oxidase 1 OS=Aspergillus niger GN=AO-... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11F10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F10-L19-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671541 ID=CX671541; Name=CX671541; organism=Citrus sinensis; type=EST; length=832bp
CTCGTGCCTCTCTTCCGGTTTATATTCAAAATGCATATATGTCTTACCAA
GAATTGCAAATTAAAAGCCACAACTCACAGCACCTCCATTACAAATGGGT
TGGAAAAGTCCAATATTTAGTAAACTAATAATACTTAATTAGTGTTCATA
TGTAAGTGCAAAGTGAGGCCAGTAGAGTACACTCATATAGATCAGATAAA
AGAGGATCAACAGGGGAAATTGGTAGCAGATAATACTATCGGGGTCAATC
ACGATCACTTCTTGAACTATTATCTTGATCTTGATATTGATGGTTATGCC
AATTCCTTTGAGAAGACCAAATTGGTTACCAGGCGAAACACAAAAGCTAA
TACACCAAGAAAGAGTTATTAGACTGTTGAAAAAGAAACAGCTAAGACTG
AATTTGAAGCTCGGCTTAAGCTTGACACAAAGCCAATGGAATTTGCAATG
GTGAATCCAAATAAGAAAACTAAAATTGGGCACCCTGTTGGCTATCGCCT
GCTTCCAGGATTAGTCGTAGGTCCGCTGCTAACGGATGATGATTATCCAC
AAATCCGAGCCGGCTTCACTGATTATAATATTTGGGTTACCCCATATAAC
AAGTCAGAAAAATATTCAGGAGGAAACTATGTTGATCAAAGCCATGGTGA
TGATACCTTATTGCAATGTACTGACGGGAATAGGGAGATTGAGAACAAGG
ATATAGTACTTTGGTACACTATGGGCATTCATCATGCTCCTTGCCAGGAA
GATTTTCCGGTGATGCCAACAGTGAGTGGTGGATTCGAGCTCCGACCAAC
TAATTTCTTTGAATATAATCCAGTGCTTAAAG
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