CX671535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 70/90 (77.78%), Postives = 74/90 (82.22%), Query Frame = -2 Query: 495 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTEDAKPTAVPTAS 764 YLDL I+ KLPLNHEILYHLQDVFNLLPNLNV EL+KAFSVKTNDMMLVIYLSSLIRSVIALH KEHEK ED+KP A+P S Sbjct: 219 YLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSKPVAIPATS 308
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.391e-18 Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = -2 Query: 528 GYLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTE 767 GYL+ KLP+NH+I+Y LQDVFNLLP++++ E +KAF +KTND M+V+YL+SLIRSV+ALH ++ EK E Sbjct: 210 GYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.172e-17 Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = -2 Query: 528 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTE 764 YL+ KLP+NH+I+Y LQDVFNLLP++++ E +KAF +KTND M+V+YL+SLIRSV+ALH ++ EK E Sbjct: 211 YLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17 Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = -2 Query: 528 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTE 764 YL+ KLP+NH+I+Y LQDVFNLLP+ ++ E +KAF +KTND M+V+YL+SLIRSV+ALH ++ EK E Sbjct: 211 YLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = -2 Query: 489 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTEDAKPTAVPTASSS 764 YL L D LP NH+I+ ++QD+ NL PNLN E+ K+F+V+ ND M VIYLSS+IRS+IALH +E EK D + PT ++S Sbjct: 209 YLKLVCDGTLPPNHQIIGYIQDIINLSPNLNANEISKSFAVQNNDTMSVIYLSSMIRSIIALHNLIINKTANREAEKKADIINSTPPTTATS 300
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 77.411 bits (189), Expect = 9.550e-14 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = -2 Query: 576 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 764 YL D K+P+NH+I+Y LQD+FNLLP++ + VKTND MLV+YL+S++RS+IALH Sbjct: 214 YLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALH 276
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = -2 Query: 519 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNV-------------AELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTEDAK 764 YL +D +LP+NH IL +LQDVFNLLPNL+ +EL A S+KTND ++ IYLSSLIR++ A H ++ ++ DAK Sbjct: 219 YLQKVLDGQLPVNHAILGNLQDVFNLLPNLSTPKSGPGATGTNADSELNHAMSIKTNDQLMAIYLSSLIRAITAFHDLIENKIQNRQQQEENDAK 313
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: RPN8_YEAST (26S proteasome regulatory subunit RPN8 OS=Saccharomyces cerevisiae GN=RPN8 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = -2 Query: 582 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIA 764 YLD I+++LP+NH IL LQDVFNLLPNL + L KA +VKTND ++VIY+S+L+RS+IA Sbjct: 210 YLDKVINKELPINHTILGKLQDVFNLLPNLGTPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRSIIA 287
BLAST of CX671535 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -2 Query: 513 YLDLFIDEKLPLNHEILYHLQDVFNLLPNLNVAELI----------KAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXKEHEKTEDAKPT 764 YL +D +LP+NH IL LQ VFNLLPN+ ++ +AF+V +ND ++ IY+SS++R+VIALH K E+ +D KPT Sbjct: 218 YLRKVVDGQLPINHAILAELQSVFNLLPNIFSGPVVSEQALESEAQRAFNVNSNDQLMSIYISSIVRAVIALHDLLDSLAASKAMEQ-QDIKPT 310 The following BLAST results are available for this feature:
BLAST of CX671535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671535 ID=CX671535; Name=CX671535; organism=Citrus sinensis; type=EST; length=768bpback to top |