CX671523

Overview
NameCX671523
Unique NameCX671523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671523_ssr92 microsatellite CX671523_ssr92:92..101. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8013 contig Csv1_Contig8013:188..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 5.055e-82
Identity = 145/203 (71.43%), Postives = 169/203 (83.25%), Query Frame = 1
Query:  181 SLGLSRGPIWTPAEQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLK 789
            ++  + G  W PAEQL  LQYCIHSNP W + ++LAFQHYIVMLGTTVLI++TLV  MGG  GDK RVIQ++LFMSG+NTLLQTL GTRLPTVMG S A+ LPVLSII DYN+G F SE  RFRHT+RT+QGSLI+SSF+NI++GY  AWGNL R FSPI++VP V VV LGLF+RGFPLL NCVEIGLPML+LL+I QQYLK
Sbjct:   26 AMARNMGTTWPPAEQLHHLQYCIHSNPSWHETVVLAFQHYIVMLGTTVLIANTLVSPMGGDPGDKARVIQTILFMSGINTLLQTLIGTRLPTVMGVSFAYVLPVLSIIRDYNNGQFDSEKQRFRHTMRTVQGSLIISSFVNIIIGYGQAWGNLIRIFSPIIVVPVVSVVSLGLFLRGFPLLANCVEIGLPMLILLIITQQYLK 228          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.634e-64
Identity = 116/192 (60.42%), Postives = 150/192 (78.12%), Query Frame = 1
Query:  214 PAEQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLK 789
            P EQLQ L+YCI SNPPWP+ +LLAFQ+YI+MLGT+  I + LVP MGG  GD+ RVIQ+LLF++G+ TLLQ LFGTRLP V+G S A+ +P+  IIND +    +++H+RF HT+R IQG+LIV+S I I+LGYS  WG  +RFFSP+ + P V +VGLG+F RGFP LGNC+EIGLPML+L++   QYLK
Sbjct:    8 PMEQLQDLEYCIDSNPPWPETVLLAFQNYILMLGTSAFIPALLVPAMGGSDGDRARVIQTLLFVAGIKTLLQALFGTRLPAVVGGSLAYVVPIAYIINDSSLQKISNDHERFIHTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGMFQRGFPQLGNCIEIGLPMLLLVIGLTQYLK 199          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.294e-61
Identity = 113/192 (58.85%), Postives = 146/192 (76.04%), Query Frame = 1
Query:  214 PAEQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLK 789
            P +QLQ L+YCI SNPPW +A+ L F+HYI+ LGT V+I S LVP+MGG  GDK RV+Q+LLF+ G+NTLLQTLFGTRLPTV+G S AF +P++SII+D +         RF  T+R +QG++IV+S + I+LG+S  W   +RFFSPI +VP + + G GLF RGFP++GNCVEIGLPML+L VI  QYLK
Sbjct:   13 PMDQLQGLEYCIDSNPPWGEAIALGFEHYILALGTAVMIPSILVPMMGGDDGDKVRVVQTLLFLQGVNTLLQTLFGTRLPTVIGGSYAFMVPIISIIHDSSLTRIEDPQLRFLSTMRAVQGAIIVASSVQIILGFSQMWAICSRFFSPIGMVPVIALTGFGLFNRGFPVVGNCVEIGLPMLILFVIFSQYLK 204          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 5.267e-55
Identity = 104/191 (54.45%), Postives = 136/191 (71.20%), Query Frame = 1
Query:  214 PAEQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYL 786
            P +QL  + YCI S PPWP+A+LL FQHY+VMLGTTVLI + LVP MGGG+ +K +VIQ++LF++G+NTLLQTLFGTRLP V+G S  F    +SII        ++  DRF   +R  QG+LIV+S + ++LG+SG W N+ RF SPI  VP V +VG GL+  GFP +  C+EIGLP L++LV   QYL
Sbjct:   19 PKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRFSDTSNPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYL 209          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 7.606e-54
Identity = 102/200 (51.00%), Postives = 138/200 (69.00%), Query Frame = 1
Query:  187 GLSRGPIWTPAEQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYL 786
            GL   P+    +QL  + YCI S PPWP+A+LL FQHY+VMLGTTVLI + LVP MGGG+ +K +++Q+LLF+SGLNTLLQ+ FGTRLP V+G S  +    LSII            ++F+  +R IQG+LIV+S + IV+G+SG W N+ R  SP+  VP V + G GL+  GFPLL  C+EIGLP ++LL++  QY+
Sbjct:   19 GLEPHPV---KDQLSSISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTYLVPQMGGGNEEKAKMVQTLLFVSGLNTLLQSFFGTRLPAVIGGSYTYVPTTLSIILAGRYSDILDPQEKFKRIMRGIQGALIVASILQIVVGFSGLWRNVVRLLSPLSAVPLVALAGFGLYEHGFPLLAKCIEIGLPEIILLLLFSQYI 215          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.890e-53
Identity = 100/191 (52.36%), Postives = 134/191 (70.16%), Query Frame = 1
Query:  214 PAEQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYL 786
            P EQL  + YCI S PPWP+A+LL FQHY+VMLGTTVLI S LVP MGG + +K ++IQ++LF++GLNTLLQT+FGTRLP V+G S  F    +SI+            +RF+  IR  QG+LIV+S + I+LG+SG W N+ RF SP+   P V +VG GL+  GFP +  C+EIGLP L++L++  QY+
Sbjct:   15 PKEQLPDISYCITSPPPWPEAVLLGFQHYLVMLGTTVLIPSALVPQMGGRNEEKAKLIQTILFVAGLNTLLQTVFGTRLPAVIGASYTFVPVTISIMLSGRFNDVADPVERFKRIIRATQGALIVASTLQIILGFSGLWRNVVRFLSPLSAAPLVGLVGYGLYELGFPGVAKCIEIGLPGLIILILISQYM 205          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.451e-52
Identity = 96/189 (50.79%), Postives = 132/189 (69.84%), Query Frame = 1
Query:  220 EQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYL 786
            +QL  +++C+ S+P WP+ ++L FQHYIVMLGTTV+I S LVPLMGGG  +K  VI ++LF+SG+NTLLQ+LFG+RLP VMG S A+ +P L I   Y    +   H RF  T+R IQG+LI++S  ++++G+ G W  L RF SP+   P V + G+GL    FP L  C+EIGLP L++L+I  QYL
Sbjct:   15 DQLPGVEFCVSSSPNWPEGIVLGFQHYIVMLGTTVIIPSILVPLMGGGDVEKAEVINTVLFVSGINTLLQSLFGSRLPVVMGASYAYLIPALYITFSYRFTYYLHPHLRFEETMRAIQGALIIASISHMIMGFFGLWRILVRFLSPLSAAPLVILTGVGLLAFAFPQLARCIEIGLPALIILIILSQYL 203          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.071e-51
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 1
Query:  220 EQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKR 792
            EQL  +QYC++S PPW +A++L FQHY++ LG TVLI S LVPLMGGG+ +K +VIQ+LLF+SGL TL Q+ FGTRLP +   S A+ +P+ SII       +T   +RF  T+R+IQG+LI++    +++   G W N+ RF SP+ I P     GLGL+  GFPLL  CVE+GLP L+LL+   QYL R
Sbjct:   25 EQLPGIQYCVNSPPPWLEAVVLGFQHYLLSLGITVLIPSVLVPLMGGGYAEKVKVIQTLLFVSGLTTLFQSFFGTRLPVIAVASYAYIIPITSIIYSTRFTYYTDPFERFVRTMRSIQGALIITGCFQVLICILGVWRNIVRFLSPLSIAPLATFTGLGLYHIGFPLLARCVEVGLPGLILLIFVTQYLPR 215          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.307e-49
Identity = 92/189 (48.68%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  220 EQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYL 786
            +QL  + YC+ S PPWP+ +LL FQHY+VMLGTTVLI + LV  +   + DK ++IQ+LLF+SG+NTL Q+ FGTRLP V+G S ++    +SI+             RF   +R IQG+LI++SF++I++G+SG W N+ RF SP+  VP V   G GL+ +GFP+L  C+EIGLP ++LLVI  QY+
Sbjct:   25 DQLYGITYCLTSPPPWPETILLGFQHYLVMLGTTVLIPTMLVSKIDARNEDKVKLIQTLLFVSGINTLFQSFFGTRLPAVIGASYSYVPTTMSIVLAARYNDIMDPQKRFEQIMRGIQGALIIASFLHILVGFSGLWRNVTRFLSPLSAVPLVAFSGFGLYEQGFPMLAKCIEIGLPEIILLVIFSQYI 213          
BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.641e-49
Identity = 96/188 (51.06%), Postives = 125/188 (66.49%), Query Frame = 1
Query:  220 EQLQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQY 783
            EQ   L YCI S PPW   +L+ FQHY+VMLGTTVLI++ +VPLMGGGH +K  VIQ++LF+SG+NTLLQ  FGTRLP VM  S  +  P ++II            +RF  T+R++QG+LI++     V+G+ G W    RF SP+  VPFV + GLGLF   FP +  C+E+GLP LVLLVI  +Y
Sbjct:   16 EQFAGLDYCITSPPPWITTVLVGFQHYLVMLGTTVLIATIIVPLMGGGHAEKAIVIQTILFLSGINTLLQVHFGTRLPAVMSGSYTYIYPAVAIILSPRYALLIDPLERFVFTMRSLQGALIIAGVFQAVVGFFGIWRVFIRFLSPLAAVPFVTLTGLGLFFFAFPGVTKCIEVGLPALVLLVIFAEY 203          
The following BLAST results are available for this feature:
BLAST of CX671523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NAT3_ARATH5.055e-8271.43Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT1_ARATH1.634e-6460.42Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT2_ARATH1.294e-6158.85Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT6_ARATH5.267e-5554.45Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT7_ARATH7.606e-5451.00Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT5_ARATH2.890e-5352.36Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT4_ARATH5.451e-5250.79Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT10_ARATH2.071e-5150.79Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT8_ARATH3.307e-4948.68Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
LPE1_MAIZE5.641e-4951.06Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11E12-J23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671523 ID=CX671523; Name=CX671523; organism=Citrus sinensis; type=EST; length=794bp
CTTTTGCTTTCTATCTTCCAGCTTCCAGCTTCAAGAAGAATAACAAATAC
GCTCGTTTTATTTCTCTGTAAAAGGAGGAAAATAATAACAAAGAGAGAGA
GGGAGAGATAGTAGTTAGAAGAAGAAATGGGGGAAACGGCCGGCCACCAC
CCGCCTCCACCACCGCAGGCGGCACCGCCGTCTCTTGGACTTTCAAGGGG
TCCCATTTGGACTCCAGCCGAGCAACTCCAGCAGCTTCAGTACTGCATCC
ACTCCAATCCTCCATGGCCTCAAGCGCTCTTACTAGCTTTCCAACACTAT
ATCGTAATGCTTGGAACAACAGTCTTAATTTCCAGTACACTGGTGCCTCT
AATGGGTGGGGGCCATGGTGATAAGGGGCGAGTGATTCAATCTTTGTTGT
TCATGTCGGGTCTGAATACGCTGCTTCAAACACTTTTTGGGACAAGACTT
CCTACGGTGATGGGTCCATCCGCTGCTTTCACCCTGCCAGTATTGTCAAT
CATCAATGATTACAATGACGGGAGCTTCACATCTGAGCATGATAGGTTTC
GCCACACAATCAGAACTATTCAAGGATCACTTATAGTTTCTTCGTTTATC
AACATTGTGCTTGGATATAGTGGGGCCTGGGGAAATTTAGCAAGATTCTT
TAGTCCCATTGTAATCGTACCATTTGTTTGTGTGGTTGGGCTTGGTCTGT
TCATGAGGGGCTTCCCTCTGCTTGGTAACTGCGTGGAAATCGGCCTGCCT
ATGTTGGTTCTACTGGTGATTTGTCAACAGTATTTGAAGCGCTT
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