CX671521

Overview
NameCX671521
Unique NameCX671521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.386e-57
Identity = 105/128 (82.03%), Postives = 120/128 (93.75%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYKT 769
            LA+TL  DGRRVHVIERD+TE DRIVGELLQPGGYLKL+ELGLEDCV EIDAQ+V GYAL+ DGK+TRLSYPLEKFH+DV+GRSF+NGRF+QRMREKAAS PNVR+EQGTVTSL+E+ G++KGVQYKT
Sbjct:   89 LAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKT 216          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.507e-40
Identity = 81/129 (62.79%), Postives = 101/129 (78.29%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE--KFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            LA+ L KDGRRVHVIERD+ EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+  G  ++KDGK    S+P++   F  D S RSF+NGRF+QR+R+KA+S PNVRLE+GTV SL+EE G IKGV YK
Sbjct:   60 LAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYK 188          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE-KFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+EEIDAQ+  G  LFKDGK T   +P++  F  + SGR F+NGRF+QR+R+KA+S PNVRLE+GTV SL+EE G +KGV YK
Sbjct:   63 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYK 190          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.551e-38
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE--KFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            LA+ L KDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E+IDAQ+  G A++KDGK     +P++   F  + S RSF+NGRF+Q++R KA S  NVRLE+GTV SLLEE G +KGV YK
Sbjct:   60 LAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYK 188          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.629e-37
Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = 2
Query:  188 HYIAGTLIXXXXXXXXXXXXNDSKKPRKV---STTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            H    TL+            N  KK  K+   +T  +   D     V AG  GS               LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q   G A++KDG+   +S+P +  F  + +GR+FYNGRF+QR+R+KA+S P V+LE+GTV SL+EE G IKGV YK
Sbjct:    7 HVCLWTLLAFVLTWTVFYVNNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSA--------------LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYK 189          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.601e-35
Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            LA+ L KDGRRVHVIERD+ EP R +GEL+Q GG   L +LGLEDC+E+IDAQ+    A++KDGK   L +P +K F  +  GR   NGR +QR+R+KAAS  NV+LE+GTV SL+EE G +KGV YK
Sbjct:   58 LAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYK 185          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.253e-28
Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  278 TTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF-KDGKS-TRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            T+  +QND     V AG  GS               L   L +DGR+V VIERD+ EPDRIVGE LQPGGY  L +LGL D VE +DAQ V GY +  ++ KS  ++ YPL + +   SGR+F++GRFI  +R+ A + PN +  +G V  LLEE+  + GVQYK
Sbjct:  116 TSTSSQNDPEVIIVGAGVLGSA--------------LVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYK 266          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.528e-27
Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYAL--FKDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            LA  L +DGR+V VIERD+ EPDRIVGELLQPGGY  L ELGL D VE ++A  + GY +  ++     ++ YPL + +   SG +F++GRFI  +R+ A + PNV+  +G V  LLEE+  + GVQYK
Sbjct:  136 LAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGVQYK 264          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.187e-25
Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF--KDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766
            LA  L +DGR V VIERD+ EPDRI+GE LQPGGY  L ELGL D VE ++A  + GY +   +     ++ YP+ + +   SG +F++G+FI  +R+ A + PNV+  +G V  LLEE+  + GVQYK
Sbjct:  137 LATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGVQYK 265          
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.646e-21
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 2
Query:  386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLL-EENGTI 748
            L   LG+ GR+V V+ERD++EPDRIVGELLQPGG   L ++G+ D VE ID Q   GY +F    +  + YP +       G  F+ GRF+  +R+   S PNV + + TV  LL +E G +
Sbjct:   20 LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEV 141          
The following BLAST results are available for this feature:
BLAST of CX671521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERG1_PANGI5.386e-5782.03Squalene monooxygenase OS=Panax ginseng PE=2 SV=1[more]
ERG11_ARATH3.507e-4062.79Squalene monooxygenase 1,1 OS=Arabidopsis thaliana... [more]
ERG12_BRANA1.333e-3962.50Squalene monooxygenase 1,2 OS=Brassica napus GN=SQ... [more]
ERG12_ARATH9.551e-3858.91Squalene monooxygenase 1,2 OS=Arabidopsis thaliana... [more]
ERG11_BRANA3.629e-3745.69Squalene monooxygenase 1,1 OS=Brassica napus GN=SQ... [more]
ERG13_ARATH2.601e-3557.81Squalene monooxygenase 2 OS=Arabidopsis thaliana G... [more]
ERG1_HUMAN5.253e-2845.45Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=... [more]
ERG1_MOUSE1.528e-2749.61Squalene monooxygenase OS=Mus musculus GN=Sqle PE=... [more]
ERG1_RAT3.187e-2546.51Squalene monooxygenase OS=Rattus norvegicus GN=Sql... [more]
ERG1_SCHPO3.646e-2143.44Probable squalene monooxygenase OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11E11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11E11-J21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671521 ID=CX671521; Name=CX671521; organism=Citrus sinensis; type=EST; length=770bp
CCACCACAAAACCCCACGAAAAAACAAACAAAAACAGAAGGAGCCAGCTG
GCAGCTGCTGCTACTGCTGTTCCCAAAACAGAAACGAAATCTTGATCAAA
CAACGACCATCCATCTTTCTTGCATCATCAACCTCGGGTTCTCACCGTTT
CTTCAATCTTTCTACCGAGAACAAGGCTTCGATGGATCACTACATTGCGG
GCACTCTCATTGCCGCTGTGTTTCTCCTTCTCTTCGTTGTCCGCCGCAAC
GACAGTAAGAAGCCAAGGAAGGTTTCCACGACGTACAAGACGCAGAACGA
CGTTTTTCGGAGCTCTGTTAACGCCGGAAAGAATGGCTCCCCTACCGACG
TCATCATTGTTGGTGCCGGTGTTGCCGGTGCTGCCTTGGCTCATACTCTT
GGCAAGGATGGAAGACGAGTTCATGTGATAGAAAGAGACGTGACTGAGCC
TGACAGAATTGTTGGTGAACTGCTTCAGCCTGGAGGATACCTGAAATTAG
TTGAATTAGGTCTTGAGGATTGTGTGGAAGAAATCGATGCCCAGCAAGTA
CTTGGTTATGCTCTTTTCAAGGATGGAAAAAGTACAAGACTGTCATATCC
ATTGGAGAAATTTCATGCAGATGTTTCTGGAAGGAGCTTCTACAATGGGC
GTTTCATTCAACGGATGAGAGAAAAAGCAGCTAGTCGTCCCAATGTACGA
CTGGAGCAAGGAACTGTAACATCCCTGCTTGAAGAAAATGGGACTATAAA
AGGTGTTCAGTACAAAACTA
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