CX671520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RR9_ARATH (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.228e-67 Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = -3 Query: 197 SRLPGGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 607 SRLPGGFAAQ I GTGRRKCAIARVVLQEGTGK IINYRDAKEYLQGNPLWLQY+KVPLVTLGYE SYD+FVKAHGGGLSGQAQAITLGVARALLKVS DHRSPLKKEGLLTRD+RVVERKKAGL KARKAPQ+SKR Sbjct: 72 SRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFSKR 208
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RR9_SPIOL (30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia oleracea GN=PRPS9 PE=1 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 7.167e-66 Identity = 122/137 (89.05%), Postives = 130/137 (94.89%), Query Frame = -3 Query: 197 SRLPGGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 607 SRLPGGFAAQT+ GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQY+K PL TLGYET+YDVFVKAHGGGLSGQAQAI+LGVARALLKVS HR+PLK+EGLLTRDSR+VERKK GL KARKAPQ+SKR Sbjct: 61 SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQFSKR 197
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_NOSP7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpsI PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.557e-36 Identity = 78/125 (62.40%), Postives = 91/125 (72.80%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+ARV L GTG+ +N +D Y Q NP +L IK PL TLG E YD+ VKA GGGL+GQA ++ LGVARAL ++ D+R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 14 WGTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILVKAEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQYSKR 138
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_THEEB (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsI PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.469e-36 Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = -3 Query: 197 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 568 GTGRRK A+ARV L G+G+ IN R+ +YLQ NP++L +K PL TLG E SYD++V A GGGL+GQA AI LG+ARAL ++ ++R PLK EG LTRD R ER+K GL KARKAPQYSKR Sbjct: 14 GTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYVNATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_SYNP2 (30S ribosomal protein S9 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsI PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.318e-35 Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK +IARV L G+GK ++N R ++Y P +L +K PL TLG E+ YD+ V AHGGGL+GQA A+ LGVARAL ++ D+R PLK EG LTRD R ERKK GLHKARKAPQ+SKR Sbjct: 13 WGTGRRKASIARVRLVPGSGKVVVNNRSGEDYFNRIPGYLAVLKSPLETLGLESEYDILVNAHGGGLTGQADAVKLGVARALCELDPDNRQPLKIEGYLTRDPRCKERKKYGLHKARKAPQFSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_SYNJA (30S ribosomal protein S9 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpsI PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.937e-35 Identity = 79/125 (63.20%), Postives = 88/125 (70.40%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+ARV L GTGK IIN R +YLQ L +K PL LG E SYD+ V+AHGGG+ GQA AI LGVARAL +V +R PLK EG L RD R VERKK GL KARKAPQYSKR Sbjct: 13 WGTGRRKTAVARVRLVPGTGKLIINDRPGDQYLQYQEALLASVKAPLELLGLENSYDILVRAHGGGVHGQADAIKLGVARALCEVDPANRGPLKTEGYLKRDPRAVERKKYGLRKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_MICAN (30S ribosomal protein S9 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsI PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.937e-35 Identity = 75/125 (60.00%), Postives = 90/125 (72.00%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+A V L GTG +N RD + + P ++Q IK PL TLG E YD+ VKA GGGL+GQA A+ LGVARAL +++ ++R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 13 WGTGRRKSAVAAVRLVPGTGAITVNGRDGETHFNRIPTYIQTIKAPLETLGLENEYDIIVKAEGGGLTGQADAVKLGVARALCQLAPENRPPLKSEGYLTRDPRAKERKKYGLHKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_CYAA5 (30S ribosomal protein S9 OS=Cyanothece sp. (strain ATCC 51142) GN=rpsI PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.937e-35 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+ARV L G+G+ I+N + Y P +LQ IK PL TLG E YD+ V AHGGGL+GQA A+ LGVARAL +++ ++R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 13 WGTGRRKSAVARVRLVPGSGEIIVNKKPGNIYFNRIPDYLQAIKGPLETLGLENDYDILVNAHGGGLTGQADAVKLGVARALCELAPENRPPLKAEGYLTRDPRAKERKKYGLHKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_ANAVT (30S ribosomal protein S9 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsI PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.009e-35 Identity = 76/125 (60.80%), Postives = 90/125 (72.00%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+ARV L GTG+ I+N + Y Q N +L IK PL TLG E YD+ VKA GGGL+GQA ++ LGVARAL ++ ++R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 14 WGTGRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVKAEGGGLTGQADSVRLGVARALCQLDPENRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQYSKR 138
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_ANASP (30S ribosomal protein S9 OS=Anabaena sp. (strain PCC 7120) GN=rpsI PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.009e-35 Identity = 76/125 (60.80%), Postives = 90/125 (72.00%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+ARV L GTG+ I+N + Y Q N +L IK PL TLG E YD+ VKA GGGL+GQA ++ LGVARAL ++ ++R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 14 WGTGRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVKAEGGGLTGQADSVRLGVARALCQLDPENRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQYSKR 138 The following BLAST results are available for this feature:
BLAST of CX671520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671520 ID=CX671520; Name=CX671520; organism=Citrus sinensis; type=EST; length=831bpback to top |