CX671473

Overview
NameCX671473
Unique NameCX671473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10080 contig Csv1_Contig10080:180..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.580e-91
Identity = 166/206 (80.58%), Postives = 177/206 (85.92%), Query Frame = 3
Query:   66 AVSAAVXXXXXXXXXXXXXXXIISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            AVSAAV               IIS D+I   KVP YY++VS G R+VS+RAQVTTEAPAKVEK SKK +EGVIVNKF+PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIGVIADGVD NGKPHKLRLYS ASSALGDFGDSKTVSLCVKRLVYTN+ GE VKGVCSNFLCDLKPGAEVKITGPVGKEMLMP+DP
Sbjct:    4 AVSAAVSLPSSKSTSFSSRTSIISTDKINFNKVPLYYRNVSGGSRLVSIRAQVTTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDANGKPHKLRLYSTASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDP 209          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.172e-86
Identity = 154/207 (74.40%), Postives = 175/207 (84.54%), Query Frame = 3
Query:   63 AAVSAAVXXXXXXXXXXXXXXXIISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            AAV+AAV               I++P+R+  KKV     +VS  GRV ++RAQVTTEAPAKV K SKK +E ++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG++ DG+DKNGKPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GE+VKGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DP
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NNVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDP 207          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.452e-86
Identity = 148/191 (77.49%), Postives = 171/191 (89.53%), Query Frame = 3
Query:  129 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTE------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            +ISPD+I+ KKVP YY++VS  G++  +RAQ+ ++      APAKVEK SKKMEEG+ VNKFKPKTPY+GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI DG DKNGKPHKLRLYSIASSALGDFGD+K+VSLCVKRL+YTN+ GE +KGVCSNFLCDLKPGAEVK+TGPVGKEMLMP+DP
Sbjct:   26 VISPDKISYKKVPLYYRNVSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDP 216          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.190e-84
Identity = 152/210 (72.38%), Postives = 174/210 (82.86%), Query Frame = 3
Query:   63 AAVSAAVXXXXXXXXXXXXXXXIISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPA---KVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            AAV+AAV               I++P+R+  KKV      VS  GRV ++RAQ+TTEA A   KV K SKK +EG++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVF+TEGEVPY+EGQSIG++ DG+DKNGKPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GE+VKGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DP
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDP 210          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.751e-82
Identity = 145/187 (77.54%), Postives = 167/187 (89.30%), Query Frame = 3
Query:  129 IISPDRITLKKVPFYYKDVSTGGRVVSVRAQVT-TEAP-AKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            +I+ ++I   KVP YY++VS GG+V ++RA  +  EAP AKVEK SKKMEEGVIVNK+KPK PY GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI +G+DKNGKPHKLRLYSIAS  LGDFGDSKTVSLCVKRL+YTN++GEIVKGVCSNFLCDLKPG+EV +TGPVGKEMLMP+DP
Sbjct:   26 VITHEKINFNKVPLYYRNVSVGGKVGTIRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPEGIDKNGKPHKLRLYSIASRPLGDFGDSKTVSLCVKRLIYTNDNGEIVKGVCSNFLCDLKPGSEVVLTGPVGKEMLMPKDP 212          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.986e-82
Identity = 154/211 (72.99%), Postives = 169/211 (80.09%), Query Frame = 3
Query:   63 AAVSAAVXXXXXXXXXXXXXXXIISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEA----PAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            AA+SAAV                +SP RI LKK    Y+      RVVSV+AQVTT+     P KV KESKK EEG++VNKFKPK PY GRCLLNTKITGDDAPGETWH+VF+TEGEVPY+EGQSIGVI +G+DKNGKPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GEIVKGVCSNFLCDLKPG E KITGPVGKEMLMP+DP
Sbjct:    3 AAISAAVSLPSSKSSSLLTKISSVSPQRIFLKKSTVCYR------RVVSVKAQVTTDTTEAPPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDGGEIVKGVCSNFLCDLKPGDEAKITGPVGKEMLMPKDP 207          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.462e-78
Identity = 142/191 (74.35%), Postives = 165/191 (86.39%), Query Frame = 3
Query:  132 ISPDRITLKKVPFYYK--DVSTGGRVVSVRAQVTTEA----PAK-VEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            I+P+RI   K  FYYK  +V TG RV S++AQ+TTE     PAK VEK SKK EEGVIVN+++PK PY G+CLLNTKIT DDAPGETWHMVFS +GE+PY+EGQS+GVIADG+DKNGKPHK+RLYSIASSALGD G+S+TVSLCVKRLVYTN+ GE VKGVCSNFLCDL PG++VK+TGPVGKEMLMP+DP
Sbjct:   26 IAPERIRFTKGAFYYKSNNVVTGKRVFSIKAQITTETDTPTPAKKVEKVSKKNEEGVIVNRYRPKEPYTGKCLLNTKITADDAPGETWHMVFSHQGEIPYREGQSVGVIADGIDKNGKPHKVRLYSIASSALGDLGNSETVSLCVKRLVYTNDQGETVKGVCSNFLCDLAPGSDVKLTGPVGKEMLMPKDP 216          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.177e-76
Identity = 137/169 (81.07%), Postives = 152/169 (89.94%), Query Frame = 3
Query:  198 RVVSVRAQVTTE-------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            R + +RAQV+T        APAK EK SKK +EGV+ NK++PK PY+G+CLLNTKIT DDAPGETWHMVFSTEGE+PY+EGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN+ GEIVKGVCSNFLCDLKPG++VKITGPVGKEMLMP+DP
Sbjct:   41 RGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDP 209          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.714e-50
Identity = 95/163 (58.28%), Postives = 119/163 (73.01%), Query Frame = 3
Query:  198 RVVSVRAQVTTEAPAKVEKES--KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 680
            + VS +   T E    +  ++   K +  + +N F+P  PYIG+C+ N +I G+ APGET H++F+ EG+VPY EGQSIG+I  G DK+GKPHKLRLYSIAS+  GDFGD KTVSL VKRL YT+ +G +VKGVCSN+LCDLKPG EV ITGPVG  MLMP D
Sbjct:   47 QAVSAKPATTFEVDTTIRAQAVDAKKKGDIPLNLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPYLEGQSIGIIPPGTDKDGKPHKLRLYSIASTRHGDFGDDKTVSLSVKRLEYTDANGNLVKGVCSNYLCDLKPGDEVMITGPVGTTMLMPED 209          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_SYNY3 (Ferredoxin--NADP reductase OS=Synechocystis sp. (strain PCC 6803) GN=petH PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.227e-40
Identity = 84/165 (50.91%), Postives = 110/165 (66.67%), Query Frame = 3
Query:  189 TGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 680
            +G   V+  A  + +      KE K   + + VN ++PKTPYIG+ L N  +  + A G   H+ F  + G++ Y EGQSIG+I  G D  GKPHKLRLYSIAS+  GDFGD KTVSLCV++L Y NE GE V+GVCS +LC++K G ++ ITGPVGKEML+P D
Sbjct:   97 SGSEAVANPAPESNKTMTTTPKEKKA--DDIPVNIYRPKTPYIGKVLENYPLVREGAIGTVQHLTFDLSAGDLRYLEGQSIGIIPPGEDDKGKPHKLRLYSIASTRHGDFGDDKTVSLCVRQLEYQNEAGETVQGVCSTYLCNIKEGDDIAITGPVGKEMLLPPD 259          
The following BLAST results are available for this feature:
BLAST of CX671473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR1_TOBAC1.580e-9180.58Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR1_PEA1.172e-8674.40Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_SPIOL4.452e-8677.49Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR_VICFA3.190e-8472.38Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FENR_MESCR1.751e-8277.54Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FNRL1_ARATH2.986e-8272.99Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FNRL2_ARATH4.462e-7874.35Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR1_ORYSJ4.177e-7681.07Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_CYAPA6.714e-5058.28Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SYNY38.227e-4050.91Ferredoxin--NADP reductase OS=Synechocystis sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11C08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C08-F15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671473 ID=CX671473; Name=CX671473; organism=Citrus sinensis; type=EST; length=683bp
ACCCCTTTAAATTTTCTTCTCTCTTCATCTAAATTCTTCTTTATCATCAC
TTATCAATCATGGCTGCAGTGAGTGCTGCAGTTTCTCTTCCGACTTCCAA
GTCCACTTCGCTTCCAACCAGAACCTCTATCATCTCTCCTGACAGAATCA
CCTTAAAAAAGGTTCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGA
GTGGTTTCTGTCAGAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGA
GAAAGAGTCCAAGAAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAAC
CTAAGACACCTTACATTGGCAGATGCCTTTTAAACACTAAGATCACTGGT
GATGATGCTCCTGGAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGA
GGTTCCCTACAAAGAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTG
ACAAGAATGGGAAGCCTCACAAACTGAGATTATACTCCATTGCTAGCAGT
GCCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAG
GCTTGTGTACACCAACGAAGATGGAGAAATTGTTAAGGGAGTCTGCTCAA
ATTTCTTGTGTGACTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCT
GTTGGGAAAGAAATGCTCATGCCAAGGGATCCC
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