CX671472

Overview
NameCX671472
Unique NameCX671472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10080 contig Csv1_Contig10080:915..1584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.053e-68
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEK++DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ NEKGEKMYIQTRMA+Y  ELWELLKKDNTYVYMCGL+GMEKGIDDIMVSLAA DGID  DYKKQLKK+EQWNVEVY
Sbjct:  231 FLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYDRELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAEDGIDWFDYKKQLKKAEQWNVEVY 365
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.003e-68
Identity = 123/135 (91.11%), Postives = 130/135 (96.30%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFE++EDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK P+NFRLDFAVSREQ NEKGEKMYIQTRMAEYA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVSLAA DGID L+YKKQLK+SEQWNVEVY
Sbjct:  226 FLWKMFFEEHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKNPDNFRLDFAVSREQTNEKGEKMYIQTRMAEYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWLEYKKQLKRSEQWNVEVY 360
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.165e-67
Identity = 119/135 (88.15%), Postives = 131/135 (97.04%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEK++DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAP+NFRLDFAVSREQ NEKGEKMYIQTRMA+YA+ELWE+LKKDNTY YMCGL+GMEKGIDDIMVSLAA +GID ++YK+QLKK+EQWNVEVY
Sbjct:  235 FLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY 369
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.425e-67
Identity = 120/135 (88.89%), Postives = 130/135 (96.30%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEK+EDY+FNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ N+KGEKMYIQTRMA+YA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVSLAA DGID ++YK+ LKK+EQWNVEVY
Sbjct:  226 FLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.549e-67
Identity = 117/135 (86.67%), Postives = 130/135 (96.30%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEK++DYKFNGLAWLFLGVPT+SSLLY+EEF+KMK KAPENFR+D+A+SREQ N+KGEKMYIQTRMA+YA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVSLAANDGID  DYKKQLKK+EQWNVEVY
Sbjct:  235 FLWKMFFEKHDDYKFNGLAWLFLGVPTTSSLLYQEEFDKMKAKAPENFRVDYAISREQANDKGEKMYIQTRMAQYAAELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAANDGIDWFDYKKQLKKAEQWNVEVY 369
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.746e-66
Identity = 118/135 (87.41%), Postives = 128/135 (94.81%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEK+EDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ N+KGEKMYIQTRMA+YA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVS+   DGID ++YK+ LKK+EQWNVEVY
Sbjct:  229 FLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSIRPKDGIDWIEYKRTLKKAEQWNVEVY 363
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.893e-66
Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEKY+DYKFNGLAWLFLGVPTSSSLLYKEEF+KMK KAPENFR+D+AVSREQ N +GEKMYIQTRMAEY  ELWELLKKD+TYVYMCGL+GMEKGIDDIMVSLAA DGID  DYKKQLKK EQWNVEVY
Sbjct:  228 FLWKMFFEKYDDYKFNGLAWLFLGVPTSSSLLYKEEFDKMKAKAPENFRVDYAVSREQTNAQGEKMYIQTRMAEYKEELWELLKKDHTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.020e-63
Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLWKMFFEK+EDYKFNG AWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ NEKGEKMYIQTRMA+YA ELW LL+KDNT++YMCGL+GME+GID+IM +LA  DGI   DYKKQLKK+EQWNVEVY
Sbjct:  228 FLWKMFFEKHEDYKFNGTAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWTLLQKDNTFIYMCGLKGMEQGIDEIMSALAERDGIVWADYKKQLKKAEQWNVEVY 362
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.820e-43
Identity = 83/135 (61.48%), Postives = 102/135 (75.56%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FL +MF E + DYKFNGLAWLFLGVPTSS+LLY+EE EKM++  P NFRLD+A+SREQ + KGEKMYIQ R+AEYA E W +++K NT+VYMCGLRGME GI   M  +A  +G       K LKK ++W+VE Y
Sbjct:  229 FLRRMFEETHADYKFNGLAWLFLGVPTSSTLLYREELEKMQKANPNNFRLDYAISREQTDSKGEKMYIQNRIAEYANEFWNMIQKPNTFVYMCGLRGMEDGIQQCMEDIAKANGTTWDAVVKGLKKEKRWHVETY 363
[Close]
BLAST of CX671472 vs. ExPASy Swiss-Prot
Match: FENR_SPISP (Ferredoxin--NADP reductase OS=Spirulina sp. GN=petH PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.434e-41
Identity = 75/135 (55.56%), Postives = 105/135 (77.78%), Query Frame = -3 
Query:  263 FLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYAIELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDRLDYKKQLKKSEQWNVEVY 667
            FLW++F E++EDYKF GLAWLF G+P S ++LY++E E+++E+ PENFRL  A+SREQ+N +G KMYIQ R+ E A +LWEL++K NT+ Y+CGL+GME GID+ M + A    +D  DY+K+LKK  +W+VE Y
Sbjct:  160 FLWRIFKEQHEDYKFKGLAWLFFGIPYSPNILYQQELEELQEEFPENFRLTLAISREQQNPEGGKMYIQDRIKENADQLWELIQKPNTHTYICGLKGMEGGIDEGMSAAAGKFDVDWSDYQKELKKKHRWHVETY 294
The following BLAST results are available for this feature:
BLAST of CX671472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
FENR_MESCR1.053e-6891.85Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FNRL1_ARATH4.003e-6891.11Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FENR_SPIOL1.165e-6788.15Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR1_PEA4.425e-6788.89Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FNRL2_ARATH7.549e-6786.67Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR_VICFA3.746e-6687.41Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FENR1_ORYSJ4.893e-6688.15Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR1_TOBAC1.020e-6385.19Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR_CYAPA5.820e-4361.48Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SPISP1.434e-4155.56Ferredoxin--NADP reductase OS=Spirulina sp. GN=pet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C08-F15-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671472 ID=CX671472; Name=CX671472; organism=Citrus sinensis; type=EST; length=669bp
TTTTTTTTTTTTTTTTTGGCAGAAAGCTAAAATTGAGCAAGTTGAATTGC
CTCCAAATATATTTGCAAGATACATGATCCCTCAAGAATAAAAATCTGTA
GAGACAATAGCCGTAAATTGCTCCGTTAAAAAAGACAAAAATACAAAGAA
AATTTGAAAATAGTCTACCTATGTACACAGTGCAAAGGGAAATATCATAC
GATGGGACAAAAAGGAAAAAAAAATGAAAATGTGAGGGATGTTTTGTACA
TGTAAGGCATTAGTAGACTTCAACATTCCATTGCTCAGATTTCTTCAATT
GCTTTTTGTAGTCCAGCCGATCAATGCCATCGTTAGCAGCCAATGACACC
ATAATGTCATCGATTCCCTTCTCCATGCCTCTCAACCCACACATGTACAC
ATAAGTGTTATCTTTCTTGAGTAATTCCCACAGCTCAATTGCATATTCAG
CCATTCGGGTTTGAATGTACATCTTCTCACCCTTCTCATTCTTTTGTTCT
CTGCTCACTGCAAAGTCAAGCCTGAAGTTTTCCGGGGCCTTCTCCTTCAT
CTTCTCAAACTCCTCCTTGTAGAGTAGGGAACTGCTAGTCGGGACACCCA
AGAAGAGCCATGCCAAACCATTGAACTTGTAGTCTTCGTACTTCTCAAAG
AACATTTTCCACAAAAATC
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