CX043582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043582 vs. ExPASy Swiss-Prot
Match: PSBW_SPIOL (Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.282e-17 Identity = 48/98 (48.98%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 55 ASPVCGLPAMATTRGRVRCSLDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIY 348 +SP+ GLP+M T R +V CS++ K VDERM+TEGTGLPFGLSNN LGWILFGVFGLIWALYF+Y Sbjct: 28 SSPILGLPSM-TKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMAL-VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 123
BLAST of CX043582 vs. ExPASy Swiss-Prot
Match: PSBW_ARATH (Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana GN=PSBW PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 2.980e-17 Identity = 46/99 (46.46%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 55 ASPVCGLPAMATTRGRVRCSLDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 351 ++PV GLP M +G VRCS++ K VDERM+TEGTGLPFGLSNN LGWILFGVFGLIW +F+YT Sbjct: 27 SAPVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMAL-----VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
BLAST of CX043582 vs. ExPASy Swiss-Prot
Match: PSBW_ORYSJ (Photosystem II reaction center W protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSBW PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 232 VDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 351 VDERM+TEGTGL GLSNN LGWIL GVFGLIW+LY IYT Sbjct: 71 VDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYT 110 The following BLAST results are available for this feature:
BLAST of CX043582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043582 ID=CX043582; Name=CX043582; organism=Citrus sinensis; type=EST; length=500bpback to top |