EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12274 contig Csv1_Contig12274:34..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_ECO57 (Taurine import ATP-binding protein tauB OS=Escherichia coli O157:H7 GN=tauB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.004e-17
Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG  VLE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPVLEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_SHISS (Taurine import ATP-binding protein tauB OS=Shigella sonnei (strain Ss046) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_SHIFL (Taurine import ATP-binding protein tauB OS=Shigella flexneri GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_SHIF8 (Taurine import ATP-binding protein tauB OS=Shigella flexneri serotype 5b (strain 8401) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_SHIDS (Taurine import ATP-binding protein tauB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_SHIBS (Taurine import ATP-binding protein tauB OS=Shigella boydii serotype 4 (strain Sb227) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_ECOUT (Taurine import ATP-binding protein tauB OS=Escherichia coli (strain UTI89 / UPEC) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_ECOLI (Taurine import ATP-binding protein tauB OS=Escherichia coli (strain K12) GN=tauB PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_ECOL6 (Taurine import ATP-binding protein tauB OS=Escherichia coli O6 GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_ECOL5 (Taurine import ATP-binding protein tauB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = -3
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK  LL ++AGF   Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
TAUB_ECO573.004e-1750.00Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_SHISS8.741e-1748.86Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIFL8.741e-1748.86Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIF88.741e-1748.86Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIDS8.741e-1748.86Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIBS8.741e-1748.86Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_ECOUT8.741e-1748.86Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOLI8.741e-1748.86Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOL68.741e-1748.86Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOL58.741e-1748.86Taurine import ATP-binding protein tauB OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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