CX671432

Overview
NameCX671432
Unique NameCX671432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:701..1564. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.084e-96
Identity = 182/217 (83.87%), Postives = 193/217 (88.94%), Query Frame = -2
Query:  213 ALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 863
            ALTVDTPRLGRRE+DIKNRFTLPP LTLKNF+GLDLGKMDEANDSGLA+YVAGQIDR+LSWKDV+WLQTITKLPILVKGVLT ED             VSNHGARQLDYVPATI ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV+SLAAEGE GVR+VL+MLR+EFEL MALSGCRSLKEI+R+HI TEWD   PRP  RL
Sbjct:  153 ALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDT--PRPSARL 367          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.566e-95
Identity = 177/217 (81.57%), Postives = 193/217 (88.94%), Query Frame = -2
Query:  213 ALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 863
            ALTVDTPRLGRRE+DIKNRFTLPP LTLKNF+GLDLGKMDEANDSGLA+YVAGQIDR+LSWKD++WLQTIT +PILVKGVLT ED             VSNHGARQLDYVPATI ALEEVVKATQGR+PVFLDGGVRRGTDVFKALALGASGIFIGRPVV++LAAEGE GV++VL+MLR+EFEL MALSGCRSL EITR+HIVTEWD   PR +PRL
Sbjct:  153 ALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWDT--PRHLPRL 367          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 2.953e-94
Identity = 173/217 (79.72%), Postives = 189/217 (87.10%), Query Frame = -2
Query:  213 ALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 863
            ALTVDTPRLGRREADIKNRF LPPFLTLKNF+G+DLGKMD+ANDSGL++YVAGQIDRSLSWKDV WLQTIT LPILVKGV+TAED             VSNHGARQLDYVPATIMALEEVVKA QGRIPVFLDGGVRRGTDVFKALALGA+G+FIGRPVV+SLAAEGE GV++VL+M+R+EFEL MALSGCRSLKEI+R HI  +WD    R V RL
Sbjct:  153 ALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 369          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.172e-58
Identity = 116/201 (57.71%), Postives = 147/201 (73.13%), Query Frame = -2
Query:  267 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN---DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 860
            +TVDTP LG R  D++NRF LPP L +KNF+   L    E N   DSGLAAYVA  ID S+SW+D+KWL+ +T LPI+ KG+L  +D             VSNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+V+ LA +GEKGV+ VLE+L+EEF LAMALSGC+++K I +
Sbjct:  157 VTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.692e-57
Identity = 114/201 (56.72%), Postives = 146/201 (72.64%), Query Frame = -2
Query:  267 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN---DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 860
            +TVDTP LG R  D++NRF LPP L +KNF+  DL    + N   +SGLA YVA  ID SLSW D+ WL+ +T LPI+VKG+L  +D             VSNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+++ LA +GEKGV+ VLE+L+EEF LAMALSGC+++K I +
Sbjct:  157 VTVDTPYLGNRIDDVRNRFKLPPQLRMKNFETNDLAFSPKGNFGDNSGLAEYVAQAIDPSLSWDDITWLRRLTSLPIVVKGILRGDDAKEAVKHGVDGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.436e-48
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = -2
Query:  243 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 860
            LTVDTP LG+R AD KN F LP  L+LK F+ L L  +D     GL  Y+A  ID SL+W D+KWL++ITKLPILVKG++  +D             VSNHG RQLD  P+TI  L  + K  +GR+P+ LDGG+RRGTDV KALA GA+ + IGRP+++ L+  G+ GV +VL +L  E +LAMAL+G  ++ +I    I   WD
Sbjct:  183 LTVDTPFLGKRTADFKNSFKLPNGLSLKIFEKLMLSNLD----GGLNQYIATMIDPSLTWNDLKWLKSITKLPILVKGIMCPKDAELALQYGADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLLNSELQLAMALTGITNISDINNSII---WD 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.376e-45
Identity = 92/201 (45.77%), Postives = 131/201 (65.17%), Query Frame = -2
Query:  258 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 860
            +TVD P++G R  DI N+  L   L LK+    ++G +       +  +    ID S+ W+D+ W Q++T+LPI++KG+LT ED             VSNHG RQLD VPA+I AL EVV A +G++ V+LDGG+R G DV KALALGA  +F+GRP+++ LA +GE GV+ VL++L+ EF  +M L+GCRS+ EI +D I
Sbjct:  155 ITVDVPKVGNRRNDITNQVDLMKKLLLKDLGSPEMGNV-------MPYFQMSPIDPSICWEDLSWFQSMTRLPIILKGILTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEINQDLI 348          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.632e-42
Identity = 96/199 (48.24%), Postives = 125/199 (62.81%), Query Frame = -2
Query:  264 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 860
            +T+DTP  G R  DI+N+  L   LTL + Q    G       + +  +    I  SL W D+ W Q+IT+LPI++KG+LT ED             VSNHG RQLD V A+I AL EVV A +G+I V+LDGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL +L  EF  +MAL+GCRS+ EI R+
Sbjct:  155 ITLDTPVCGNRRHDIRNQ--LRRNLTLTDLQSPKKG-------NAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.455e-40
Identity = 93/201 (46.27%), Postives = 126/201 (62.69%), Query Frame = -2
Query:  258 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 860
            +T+DTP LG R  D +N+  L   + LK+ + L   K ++   S   ++       S  W D+  LQ+IT+LPI++KG+LT ED             VSNHG RQLD V A+I AL EVV A +G+I V++DGGVR GTDV KALALGA  IF+GRP+++ LA +GE GV+ VL++L  E    M LSGC+S+ EI+ D I
Sbjct:  155 ITIDTPVLGNRRRDKRNQLNLEANILLKDLRAL---KEEKPTQSVPVSFPKA----SFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLI 348          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.144e-40
Identity = 94/201 (46.77%), Postives = 125/201 (62.19%), Query Frame = -2
Query:  258 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 860
            +TVD P LG R  + ++   L   + LK+ +     K      SGL   ++     S  W D+  LQ++T+LPI++KG+LT ED             VSNHG RQLD VPA+I AL EVV A  G+I V++DGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL++L+EE    MALSGCRS+ EI+ D I
Sbjct:  155 VTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESK------SGLPTPLS-MPSSSSCWNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEISPDLI 348          
The following BLAST results are available for this feature:
BLAST of CX671432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX2_ARATH1.084e-9683.87Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH1.566e-9581.57Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
GOX_SPIOL2.953e-9479.72Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
HAOX1_HUMAN1.172e-5857.71Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE1.692e-5756.72Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX_DICDI1.436e-4849.51Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_BOVIN7.376e-4545.77Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
HAOX2_HUMAN7.632e-4248.24Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX2_RAT2.455e-4046.27Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_MOUSE7.144e-4046.77Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A07-B13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671432 ID=CX671432; Name=CX671432; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTATCAATCAACATCCGAGCAAAAACTATATAGATAAAGTTTTA
AAGAAAGAATATACAGGAAAGGGCAGAAGTAGCCATAATCATCATAACAG
AAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAAGAA
AAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTTGCA
TGCACGTATCTATAACCTGGGAACCGGACGAGGGAGAGAAGCATCCCATT
CAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCACTT
AGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCTTCT
AACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTCCAA
TAAATATACCAGAGGCTCCAAGTGCCAAGGCTTTGAAGACATCAGTTCCT
CGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGCTTT
CACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTTGAC
GAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACTGCA
ATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAATTT
GGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGATCAA
TTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCCATC
TTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGGTAG
AGTGAATCTGTTTTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGGTAT
CAACTGTTAGAGCA
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