CX671431

Overview
NameCX671431
Unique NameCX671431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5520 contig Csv1_Contig5520:1..797. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.826e-58
Identity = 122/150 (81.33%), Postives = 125/150 (83.33%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV           LSTANFDQKIGVQIIQNALKTPVHTI            GKLLEQDN DLGYDAAKGEYVDM+K+GIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK+EKE P
Sbjct:  415 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKDEKEVP 564          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.681e-56
Identity = 119/150 (79.33%), Postives = 124/150 (82.67%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV           L TANFDQKIGVQIIQNALKTPVHTI            GKLLEQ+NTDLGYDAAKGEYVDMVK+GIIDPLKVIRTALVDAASVSSLMTTTE+I+VE+PKEE  AP
Sbjct:  417 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKTGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEAPAP 566          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.090e-55
Identity = 118/150 (78.67%), Postives = 122/150 (81.33%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV           L TANFDQKIGVQIIQNALKTPVHTI            GKLLEQD+ DLGYDAAKGEYVDMVK+GIIDPLKVIRTALVDAASVSSLMTTTE +VVELPK+E E P
Sbjct:  415 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTEVVVVELPKDENEVP 564          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.428e-55
Identity = 118/150 (78.67%), Postives = 122/150 (81.33%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV           L TANFDQKIGVQIIQNALKTPVHTI            GKLLEQ NTDLGYDAAK EYVDMVK+GIIDPLKVIRTALVDAASVSSLMTTTE+I+VE+PKEE  AP
Sbjct:  417 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEAPAP 566          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.684e-54
Identity = 115/149 (77.18%), Postives = 123/149 (82.55%), Query Frame = -3
Query:  359 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 805
            ASEAEVGEKKDRVTDALNATKAAVEEGI+PGGGV           L TANFDQKIGVQIIQNALKTPV+TI            GKLLEQDN DLGYDAAKGEYVDMVK+GIIDPLKVIRTALVDAASVSSL+TTTEA+VV+LPK+E E+
Sbjct:  414 ASEAEVGEKKDRVTDALNATKAAVEEGILPGGGVALLYAARELEKLPTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVVDLPKDESES 562          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 112/150 (74.67%), Postives = 120/150 (80.00%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASE EV EKKDRVTDALNATKAAVEEGIVPGGGV           LSTANFDQKIGVQIIQNALKTPV+TI            GKLLEQDN DLGYDAAKGEYVDM+K+GIIDPLKVIRTALVDAASVSSL+TTTEA+V E+P +E  +P
Sbjct:  415 ASETEVSEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVTEIPTKEVASP 564          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.473e-52
Identity = 112/150 (74.67%), Postives = 120/150 (80.00%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASE+EVGEKKDRVTDALNATKAAVEEGIVPGGGV           LSTANFD KIGVQIIQNALKTPV+TI            GKLLE DN DLGYDAAKGEYVDMVKSGIIDP+KVIRTALVDAASVSSL+TTTEA+V E+P +E  +P
Sbjct:  418 ASESEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDHKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLESDNPDLGYDAAKGEYVDMVKSGIIDPVKVIRTALVDAASVSSLLTTTEAVVTEIPTKEDASP 567          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.806e-41
Identity = 94/150 (62.67%), Postives = 109/150 (72.67%), Query Frame = -3
Query:  356 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 805
            ASE+EVGE+KDRVTDALNAT+AAVEEGI+PGGGV           L T N DQ+ GVQI+QNALK P  TI            GKLLEQD+ + G+DAAKG+YVDMVK+GIIDP+KVIRTAL DAASVS L+TTTEA V  L K ++  P
Sbjct:  414 ASESEVGERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLQTENEDQRRGVQIVQNALKAPAFTIAANAGYDGSLVVGKLLEQDDCNFGFDAAKGKYVDMVKAGIIDPVKVIRTALTDAASVSLLLTTTEASV--LVKADENTP 561          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH60_CHICK (60 kDa heat shock protein, mitochondrial OS=Gallus gallus GN=HSPD1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37
Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = -3
Query:  362 SEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKE 802
            S+ EV EKKDRVTDALNAT+AAVEEGIVPGGG            L  AN DQKIG++II+  LK P  TI             K+L Q ++++GYDA  GE+V+MV+ GIIDP KV+RTAL+DAA V+SL++T EA+V E+PKEEKE
Sbjct:  410 SDVEVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRCIPALDALKPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGEFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEVPKEEKE 555          
BLAST of CX671431 vs. ExPASy Swiss-Prot
Match: CH60_DICDI (60 kDa heat shock protein, mitochondrial OS=Dictyostelium discoideum GN=hspA PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.480e-36
Identity = 82/145 (56.55%), Postives = 103/145 (71.03%), Query Frame = -3
Query:  371 ASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXLSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 805
            ASE EVGEKKDR+TDALNATKAAVEEGIVPGGG            +   NFDQ IGV+I+++AL  P  TI            G+LL + + + GY+A KG Y +M+++GIIDP KV+RTAL+DAASV+SLMTTTEA+VVE+ K+
Sbjct:  400 ASEVEVGEKKDRITDALNATKAAVEEGIVPGGGTALLYSTLALKKIKMDNFDQTIGVKIVRDALLIPCKTIANNAGVEGSVVIGRLLSKRDFEYGYNAQKGVYENMIQAGIIDPTKVVRTALIDAASVASLMTTTEAMVVEIKKD 544          
The following BLAST results are available for this feature:
BLAST of CX671431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH62_CUCMA6.826e-5881.33Chaperonin CPN60-2, mitochondrial OS=Cucurbita max... [more]
CH61_MAIZE1.681e-5679.33Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=C... [more]
CH61_CUCMA1.090e-5578.67Chaperonin CPN60-1, mitochondrial OS=Cucurbita max... [more]
CH62_MAIZE2.428e-5578.67Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=C... [more]
CH60A_ARATH2.684e-5477.18Chaperonin CPN60, mitochondrial OS=Arabidopsis tha... [more]
CH60B_ARATH1.128e-5274.67Chaperonin CPN60-like 1, mitochondrial OS=Arabidop... [more]
CH60_BRANA1.473e-5274.67Chaperonin CPN60, mitochondrial OS=Brassica napus ... [more]
CH60C_ARATH5.806e-4162.67Chaperonin CPN60-like 2, mitochondrial OS=Arabidop... [more]
CH60_CHICK8.675e-3756.4660 kDa heat shock protein, mitochondrial OS=Gallus... [more]
CH60_DICDI1.480e-3656.5560 kDa heat shock protein, mitochondrial OS=Dictyo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_11A06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A06-B11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671431 ID=CX671431; Name=CX671431; organism=Citrus sinensis; type=EST; length=807bp
TTTTTTGTTTTTTTTCAAGCACCAAATATGCAAGGAAGATATATTTTATT
TTGAAATAAAATACAGTTCAATTAAAAACCAACCAATCATCCAAGTGGAT
TGCCAAACGACCTAAATCAGCAATGTTTTATCCTAAATTGCCAAACGACC
TAAATGCCTACCTCTCACTATGATTACAAGGATGCCTTATGATTGACACA
ATTGAGACTCATTAAGCTGGCCACAAAATCCTAACATTCAGATTGTATGT
TGATTATGGAACCCCAAAAAAAAAAAAAAGGGACAATCAGTTAAGCATTC
TACTGGGATTTCAATAGTCCATGCCGCCCATTCCGCCCATGCCACCCATG
CCTCCCGGAGCTTCCTTCTCCTCCTTAGGCAGCTCAACAACAATAGCTTC
AGTTGTGGTCATTAAAGATGATACACTTGCAGCATCAACCAAAGCAGTTC
TGATTACTTTCAATGGATCGATAATTCCAGATTTGACCATATCAACATAC
TCACCTTTGGCGGCATCATACCCAAGGTCAGTGTTGTCCTGCTCCAATAG
CTTACCAACCACAACAGCCACCTCAACTCCTGCATTAGCAGCAATTGTGT
GCACTGGTGTCTTTAGAGCATTCTGAATAATCTGAACACCAATCTTCTGG
TCAAAGTTAGCAGTGGACAGCTTTTCCAACTCTTTTGCCGCATATAGAAG
GGCAACACCACCACCCGGCACAATACCCTCTTCTACAGCTGCCTTTGTCG
CATTCAAAGCATCAGTAACTCTATCTTTCTTCTCACCAACTTCAGCTTCA
CTAGCTC
back to top