CX671428

Overview
NameCX671428
Unique NameCX671428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1575 contig Csv1_Contig1575:171..994. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.804e-61
Identity = 108/158 (68.35%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.804e-61
Identity = 108/158 (68.35%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.804e-61
Identity = 108/158 (68.35%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.804e-61
Identity = 108/158 (68.35%), Postives = 133/158 (84.18%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL KP L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.804e-61
Identity = 108/158 (68.35%), Postives = 133/158 (84.18%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL KP L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.356e-61
Identity = 109/158 (68.99%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY+VDAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.019e-61
Identity = 107/158 (67.72%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPR+RSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.249e-61
Identity = 107/158 (67.72%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRF+SMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.855e-61
Identity = 108/158 (68.35%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD D +  S++ELH+LL K  L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL8_DROME (ADP-ribosylation factor-like protein 8 OS=Drosophila melanogaster GN=Gie PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.953e-61
Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = -1 
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+T+GNVTIK+WD+GGQPRFRSMWERYCR V+AIVY+VDAAD D L  SR+ELH LL KP L GIP+LVLGNK D P AL +  L+E+M L SI DRE+CCY ISCK   NID  + W
Sbjct:   19 EEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERMNLSSIQDREICCYSISCKEKDNIDITLQW 176
The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 213
Match NameE-valueIdentityDescription
ARL8B_RAT1.804e-6168.35ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_MOUSE1.804e-6168.35ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN1.804e-6168.35ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL8A_HUMAN1.804e-6168.35ADP-ribosylation factor-like protein 8A OS=Homo sa... [more]
ARL8A_CHICK1.804e-6168.35ADP-ribosylation factor-like protein 8A OS=Gallus ... [more]
AR8BA_DANRE2.356e-6168.99ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]
ARL8B_MACFA4.019e-6167.72ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARL8B_BOVIN5.249e-6167.72ADP-ribosylation factor-like protein 8B OS=Bos tau... [more]
ARL8A_XENTR6.855e-6168.35ADP-ribosylation factor-like protein 8A OS=Xenopus... [more]
ARL8_DROME8.953e-6168.99ADP-ribosylation factor-like protein 8 OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTAAGCTTTCAAACCACTATTTTATTAAAAAAGCACAGCAAATAC
AGTACATGTTTACAACACAAGGCACACCAATATAGATCTATACATGAAAG
TATGATCACTTGGTATCTCAGCAATTAATACATGGGTGTTCCCAGATTCC
TGATGTAAAACTAAACAAATTATGATTTACGATAAAAAGCCAAGTCGAAA
TAAAAAACTATGGTCACACATCGACTGACCCGAGCAGACTAACAGTACAG
CTCACTCAACTCATCCTGAATCAGTTGTTGAAAACAGGCTCCCATGTAGT
TCAAAACTAGAGGAAGAAACTCAACTCTTTGATTTTGAATGCTTTACAAG
CCAATCAATAACCGTGTCAATGTTGGTAGAGTTTTTGCATGAAATCATGT
AGCAACAAACTTCTCTATCGGTAATGGACTTCAGCCCCATTTGTTCCATC
AGATCCTCTTTAGACAAGGCTTCTGGTTTATCAATCTTGTTTCCCAGTAC
CAGCAATGGGATACCATTCAGCGAGGGTTTACTTAACAAGTCATGGAGTT
CACTTCTTGACACAGGCAAGTTATCATAATCAGCAGCATCAACAACGTAA
ACAATAGCTGAAACTGCACGACAGTATCTCTCCCACATACTGCGAAACCG
TGGTTGGCCTCCAAGATCCCACAGCTTTATTGTGACATTCCCCTTAGTCA
CTTTCCTCATATTAAATCCTACTGTTGGGATCATATCTTCACTATATCCA
CCAGTTGCGATAACATTCACAAGGGATGTCTTGCCTGCATTCTGAAGCCC
TATCAAAGATAGCTCCATTTCTTG
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