CX671414

Overview
NameCX671414
Unique NameCX671414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5053 contig Csv1_Contig5053:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA21_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 3.692e-94
Identity = 171/203 (84.24%), Postives = 184/203 (90.64%), Query Frame = 1
Query:  148 AFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 756
            AFD EYSRWLEEHN+HI ELR AVN+HA D ELR+IV+NVT+HFDE+FR+KG A+KADVFH+LSGMWKTPAERCFMWIGGFR SELLKLLVNQLEPLTEQQL GIYNLQQSS QAEDALSQGM+ALQQSLAETLAN          +VANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR+LTTRQSARALLAIN+YF
Sbjct:  235 AFDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEVFRVKGNAAKADVFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQAEDALSQGMEALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRVLTTRQSARALLAINEYF 437          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 328.176 bits (840), Expect = 3.576e-89
Identity = 164/205 (80.00%), Postives = 180/205 (87.80%), Query Frame = 1
Query:  142 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 756
            A AFD+EY+RWLEEHN+HI ELRAA N+HAGD +LR IVD++ S +DE FRLKG+A+KADVFH+LSGMWKTPAERCFMW+GGFRSSELLKLL  QLEPLTEQQL GI NLQQSSQQAEDALSQGM+ALQQSLAETLA+          NVA+YMGQMAMAMGKLGTLE FLRQADNLR QTLQQM RILTTRQSARALLAI+DYF
Sbjct:  256 AVAFDMEYARWLEEHNKHINELRAAANAHAGDDDLRKIVDSIMSQYDEFFRLKGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQLTGICNLQQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYF 460          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.077e-85
Identity = 161/205 (78.54%), Postives = 177/205 (86.34%), Query Frame = 1
Query:  142 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLA-NXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 753
            A AFD EY+RWLEEHNR + ELRAAVN+HAGDTELR++V+ + SH+DEIF+ KG A+KADVFH+LSGMWKTPAERCF+W+GGFR SELLKLL  QLEPLTEQQL GI NLQQSSQQAEDALSQGM+ALQQSLAETLA +          NVANYMGQMAMAMGKLGTLE FL QADNLRQQTLQQM RILTTRQSARALL I+DY
Sbjct:  111 ALAFDTEYARWLEEHNRQVNELRAAVNAHAGDTELRSVVEKIMSHYDEIFKQKGNAAKADVFHVLSGMWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSSQQAEDALSQGMEALQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLSQADNLRQQTLQQMQRILTTRQSARALLVISDY 315          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA2_ARATH (Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 9.432e-82
Identity = 151/205 (73.66%), Postives = 180/205 (87.80%), Query Frame = 1
Query:  142 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 756
            A AFD E+SRWLEE N+ + ELR+A+N+HAGD+ELR IVD V +H++E+FR+K  A+K DVFH+LSGMWKTPAERCF+W+GGFRSSELLKLL NQLEP+TE+QL+GI NLQQ+SQQAEDALSQGM++LQQSLA+TL++          NVA+YMGQMAMAMGKLGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DYF
Sbjct:  111 ALAFDAEHSRWLEEKNKQMNELRSALNAHAGDSELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQGMESLQQSLADTLSS-GTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA6_ARATH (Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.779e-80
Identity = 149/204 (73.04%), Postives = 179/204 (87.75%), Query Frame = 1
Query:  142 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 753
            A AFD E+SRWLEE NR + ELR+A+N+HAGDTELR IVD V +H++E+FR+K  A+K DVFH+LSGMWKTPAERCF+W+GGFRSSELLKLL NQLEP+TE+Q++GI +LQQ+SQQAEDALSQGM++LQQSLA+TL++          NVA+YMGQMAMAMG+LGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DY
Sbjct:  111 ALAFDAEHSRWLEEKNRQMNELRSALNAHAGDTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQTSQQAEDALSQGMESLQQSLADTLSS-GTLGSSSSDNVASYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDY 313          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.841e-77
Identity = 145/204 (71.08%), Postives = 174/204 (85.29%), Query Frame = 1
Query:  142 AAAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 753
            A AFDVEY RW E+ NR + EL +A++SHA D+ELR IVD V +H++E++R+KG A+K+DVFH+LSGMWKTPAERCF+W+GGFRSSELLKL+ +QLEPLTEQQ + I NLQQSSQQAEDALSQGMD LQQSLA+TL++          NVA+YMGQMAMAMGKLGTLEGF+RQADNLR QT QQM R+LTTRQSARALLA+++Y
Sbjct:  111 AMAFDVEYRRWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDNLQQSLADTLSS-GTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNY 313          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA3_ARATH (Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.568e-58
Identity = 112/204 (54.90%), Postives = 148/204 (72.55%), Query Frame = 1
Query:  145 AAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 756
            AAF++EY+ WLEE NR + E+R A+ +H GD EL+ +VD+  +H+  +FR+K  A+KADVF ++SGMW+T  ER F WIGGFR SELL +++  +EPLT+QQL+ + NLQQSSQQAE+ALSQG+D LQQ L E++A              N+   MA AM  L  LE F+ QAD+LRQQTLQQM +ILTTRQ+AR LLA+ +YF
Sbjct:  168 AAFEMEYTHWLEEQNRRVSEIRTALQAHIGDIELKMLVDSCLNHYANLFRMKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQQSSQQAEEALSQGLDKLQQGLVESIA-----IQIKVVESVNHGAPMASAMENLQALESFVNQADHLRQQTLQQMSKILTTRQAARGLLALGEYF 366          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA4_ARATH (Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 9.498e-58
Identity = 110/203 (54.19%), Postives = 147/203 (72.41%), Query Frame = 1
Query:  148 AFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 756
            AF++EY  W+EE NR I ELR  ++    D ELR++V+N   H+ ++FR+K  A+K DVF+++SGMWKT AER F+WIGGFR SELLK+L+   +PLT+QQL+ + NL+QS QQAEDALSQGM+ LQ +LAE++A              +Y+ QM  AM +L  L  F+ QAD+LR +TLQQMHRILTTRQ+AR LLA+ +YF
Sbjct:  151 AFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLFRMKSAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLRQSCQQAEDALSQGMEKLQHTLAESVA-------AGKLGEGSYIPQMTCAMERLEALVSFVNQADHLRHETLQQMHRILTTRQAARGLLALGEYF 346          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA7_ARATH (Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.050e-56
Identity = 110/203 (54.19%), Postives = 149/203 (73.40%), Query Frame = 1
Query:  145 AAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 753
            A+F++EYS WL+E +R + ELR A+ SH  D EL+ +V++  +H+  +F++K  A+KADVF+++SGMW+T  ER F WIGGFR SELL +++  L+PLT+QQ++ + NLQQSSQQAEDALSQG+D LQQSLAE++               +Y   MA A+  L  LEGF+ QAD+LRQQTLQQM +ILTTRQSAR LLA+ +Y
Sbjct:  153 ASFEMEYSHWLQEQSRRVSELRTALQSHISDIELKMLVESCLNHYANLFQMKSDAAKADVFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQAEDALSQGIDKLQQSLAESIV------IDAVIESTHYPTHMAAAIENLQALEGFVNQADHLRQQTLQQMAKILTTRQSARGLLALGEY 349          
BLAST of CX671414 vs. ExPASy Swiss-Prot
Match: TGA1_ARATH (Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.516e-55
Identity = 107/204 (52.45%), Postives = 147/204 (72.06%), Query Frame = 1
Query:  145 AAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTELRTIVDNVTSHFDEIFRLKGIASKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXXNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 756
            AAF++EY  W+EE NR I ELR  ++ H  D ELR++V+N   H+ E+FR+K  A+KADVF ++SGMW+T AER F+WIGGFR S+LLK+L+   + LT+QQL+ + NL+QS QQAEDAL+QGM+ LQ +LA+ +A              +Y+ Q+  AM +L  L  F+ QAD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct:  154 AAFEMEYGHWVEEQNRQICELRTVLHGHINDIELRSLVENAMKHYFELFRMKSSAAKADVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLLDVCNLKQSCQQAEDALTQGMEKLQHTLADCVA-------AGQLGEGSYIPQVNSAMDRLEALVSFVNQADHLRHETLQQMYRILTTRQAARGLLALGEYF 350          
The following BLAST results are available for this feature:
BLAST of CX671414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TGA21_TOBAC3.692e-9484.24TGACG-sequence-specific DNA-binding protein TGA-2.... [more]
HBP1C_WHEAT3.576e-8980.00Transcription factor HBP-1b(c1) (Fragment) OS=Trit... [more]
HBP1B_WHEAT1.077e-8578.54Transcription factor HBP-1b(c38) OS=Triticum aesti... [more]
TGA2_ARATH9.432e-8273.66Transcription factor TGA2 OS=Arabidopsis thaliana ... [more]
TGA6_ARATH1.779e-8073.04Transcription factor TGA6 OS=Arabidopsis thaliana ... [more]
TGA5_ARATH1.841e-7771.08Transcription factor TGA5 OS=Arabidopsis thaliana ... [more]
TGA3_ARATH5.568e-5854.90Transcription factor TGA3 OS=Arabidopsis thaliana ... [more]
TGA4_ARATH9.498e-5854.19Transcription factor TGA4 OS=Arabidopsis thaliana ... [more]
TGA7_ARATH1.050e-5654.19Transcription factor TGA7 OS=Arabidopsis thaliana ... [more]
TGA1_ARATH1.516e-5552.45Transcription factor TGA1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10H09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10H09-O18-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671414 ID=CX671414; Name=CX671414; organism=Citrus sinensis; type=EST; length=835bp
GACTTTTTAATGGTCTGCCGATATGTTCTGTGAGATCTGTGAGATCCAAG
GAAAGCATTTAAAGTCTTGCTGCAACATCAAAGTTGCTTGTTCATAATTA
TATTGGATCAAAATCTCTGCTGCATGAGCTTAATATACTGTGCAGCAGCA
TTTGATGTAGAATATTCTCGCTGGCTTGAAGAGCACAACAGGCATATAGT
TGAGCTAAGGGCTGCAGTCAATTCACATGCAGGGGACACTGAACTCCGTA
CTATCGTTGACAACGTTACATCACACTTTGATGAAATTTTCAGGCTTAAA
GGCATTGCTTCAAAGGCTGATGTCTTCCACATCTTGTCAGGAATGTGGAA
GACACCAGCAGAAAGGTGTTTTATGTGGATTGGTGGGTTTCGGTCATCTG
AGCTCCTTAAGCTTCTTGTGAATCAGTTGGAGCCTTTAACCGAGCAGCAG
TTGGTAGGCATCTATAATTTGCAGCAGTCATCCCAACAGGCAGAAGATGC
TCTGTCACAAGGGATGGATGCATTGCAGCAATCTCTGGCTGAGACATTGG
CCAATGGGTCACCCAGCCCATCGGGAACATCTGGGAATGTTGCAAACTAC
ATGGGTCAAATGGCCATGGCAATGGGAAAGCTAGGAACTCTTGAAGGGTT
TCTTCGGCAGGCTGATAATCTACGTCAGCAAACTCTACAACAGATGCATC
GTATATTGACCACCCGACAATCAGCTCGTGCGTTGCTCGCAATAAATGAT
TACTTCTCTAGGCTTAGAGCCCTCAGTTCTCTCTGGCTGGCCCGGCCACG
GGAGTGAGAGACAGTTCCTCTTCAAAAAGTTATTC
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