CX671380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.469e-85 Identity = 152/222 (68.47%), Postives = 182/222 (81.98%), Query Frame = -2 Query: 196 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDKPLKKSVRETQEEVTRHWKRFVKGRR 861 VSGHKYGLVYAG+GWVVWR KDDLPDEL+FHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG+EGYKN+MENC NA LREGLEKTGRF I+SK++GVPLVAFSLKD+ H FEISE LR+FGWIVPAYTMP NA+++ VLRVV+REDFSR+L ERL+ IE+VL E+++LP+RV+ K A V G + KK+ E Q E+ WK+FV+ ++ Sbjct: 273 VSGHKYGLVYAGIGWVVWRNKDDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISETLRRFGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELDTLPARVNAKLA-VAEEQAAANGSEVHKKTDSEVQLEMITAWKKFVEEKK 493
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.919e-85 Identity = 150/229 (65.50%), Postives = 186/229 (81.22%), Query Frame = -2 Query: 184 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHV-IPMVNETQGD--KPLKKSVRETQEEVTRHWKRFVKGRRAGAC 861 VSGHKYGLVYAGVGWV+WR+K+DLPDELVFHINYLGSDQPTFTLNFSKGS QIIAQYYQ IRLGFEGYKN+M+NC+ NA+ L EG+ K GRF+I+SKDVGVP+VAFSL+DSS +TVFE+SE LR+FGWIVPAYTMP +AE++AVLRVV+REDFS SL ERL+S IE++L E+++ P R+ TK V V + +GD ETQ+++ +HW++ + +G C Sbjct: 274 VSGHKYGLVYAGVGWVIWRSKEDLPDELVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTAEEVRDDKGDGLHHFHMDTVETQKDIIKHWRKIAGKKTSGVC 502
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 302.368 bits (773), Expect = 2.195e-81 Identity = 149/231 (64.50%), Postives = 184/231 (79.65%), Query Frame = -2 Query: 184 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDK---PLKKSVRETQEEVTRHWKRFVKGRR--AGAC 861 VSGHKYGLVYAG+GWV+WR K+DLP+EL+FHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG EGY+N+MENC N LREGLEKT RF I+SKD GVPLVAFSLKDSS HT FEIS+ LR++GWIVPAYTMP NA+++ VLRVV+REDFSR+L ERL+ IE+V++E++ LPSRV K + + +E+ D +KKS + Q ++ WK+FV R+ +G C Sbjct: 273 VSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKIS-LGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRKKTSGIC 502
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.423e-80 Identity = 149/228 (65.35%), Postives = 182/228 (79.82%), Query Frame = -2 Query: 184 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDKPLKKSVRETQEEVTRHWKRFVKGRRA--GAC 861 VSGHKYGLVYAG+GWVVWR +DLP+EL+FHINYLG+DQPTFTLNFSKGSSQIIAQYYQ IRLGFEGYKN+MENC+ N L+EG+EKT RF I+SKD GVP+VAFSLKD S H FEISE LR+FGWIVPAYTMPA+A+++ VLRVV+REDFSR+L ERL++ I +VL E+++LPS++S K I + E +K ++K E EV W++FVK R+ G C Sbjct: 272 VSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKISKKMG--IEGIAENVKEKKMEK---EILMEVIVGWRKFVKERKKMNGVC 494
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.455e-40 Identity = 77/170 (45.29%), Postives = 112/170 (65.88%), Query Frame = -2 Query: 355 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 858 SGHKYGLVY GVGWV+WR K LP+EL+F ++YLG + PT +NFS +SQ+I QYY F+R GF+GYK I E A L E +EKTG FEI++ +P+V + LK++S ++++++ L GW VPAY +P N EN + R+V+R DF ++ + ++E + Sbjct: 274 SGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMYLAEEIEKTGMFEIMNDGAQLPIVCYKLKENSNRGWNLYDLADRLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAI 443
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.330e-40 Identity = 76/173 (43.93%), Postives = 113/173 (65.32%), Query Frame = -2 Query: 346 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 858 SGHKYGLVY GVGWV+WR K LP+EL+F ++YLG + PT +NFS +SQ+I QYY F+R GF+GYK I E A L + +EKTG FEI++ +P+V + LK+ S ++++++ L GW VPAY +P N EN + R+V+R DF ++ + ++E ++ + Sbjct: 274 SGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMFLAKEIEKTGMFEIMNDGSQLPIVCYKLKEDSNRGWNLYDLADRLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIEAL 446
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 6.048e-39 Identity = 78/189 (41.27%), Postives = 117/189 (61.90%), Query Frame = -2 Query: 307 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES---LPSRVSTKTAH 858 SGHKYGLVY GVGW++WR K+ LP+ELVF ++YLG PT +NFS+ +SQII QYY F+R G+EGY+ I A L + + +TG FEI + +P+V + LKD + A T++++++ L+ GW VPAY +P N + R V R D +++V + + E ++E+ + L V+T H Sbjct: 270 SGHKYGLVYPGVGWILWRDKEYLPEELVFDVSYLGGHMPTMAINFSRSASQIIGQYYNFLRFGYEGYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLADRLQMKGWQVPAYPLPKEMGNTIIQRYVCRGDLGQNMVTAFKNDLSESIEELNNAHILYHDVNTSKTH 458
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.898e-39 Identity = 72/175 (41.14%), Postives = 113/175 (64.57%), Query Frame = -2 Query: 340 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 858 SGHKYGLVY G+GWV+W+ + LP+EL+F ++YLG + PT +NFS+ +S II QYY F+R GFEGY+ I + A+ L +E+TG F+I + +P+V + LKD + T++++++ L+ GW VPAY +P N EN+ + R V R D ++ E I + ++E+ + Sbjct: 272 SGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLADRLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNN 446
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38 Identity = 74/174 (42.53%), Postives = 109/174 (62.64%), Query Frame = -2 Query: 343 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 858 SGHKYGLVY GVGW++W+ K+ LP EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK+G FEI++ +P+V + LKD T++++++ L GW VPAY +PA+ + + R V R D ++ E + + L +E Sbjct: 275 SGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTALYLSKTVEKSGYFEIINDGSNLPIVCYKLKDDLDVEWTLYDLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADALHNLE 448
BLAST of CX671380 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38 Identity = 71/175 (40.57%), Postives = 113/175 (64.57%), Query Frame = -2 Query: 340 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 858 SGHKYGLVY G+GWV+W+ + LP+EL+F ++YLG + PT +NFS+ +S II QYY F+R GFEGY+ I + A+ L +E+TG F+I + +P+V + LKD + T++++++ L+ GW VPAY +P + EN+ + R V R D ++ E I + ++E+ + Sbjct: 272 SGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFNDGSHLPIVCYKLKDDANVNWTLYDLADRLQMRGWQVPAYPLPKSLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNN 446 The following BLAST results are available for this feature:
BLAST of CX671380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671380 ID=CX671380; Name=CX671380; organism=Citrus sinensis; type=EST; length=862bpback to top |