CX671378

Overview
NameCX671378
Unique NameCX671378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1629 contig Csv1_Contig1629:237..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671378 vs. ExPASy Swiss-Prot
Match: AEDO_MOUSE (2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.654e-13
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query:  247 MVSPVQRLYETCKDVFANCSAGI---VPS-PEKIERLKAVLDGIKPEDVSVMPEQPYFRRQAGRKYPAITYQHIFECEKFSMGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 588
            M S +QR+       F   S G     P  PE +  LK++L  ++ ED+++ P +    +   R  P +TY HI+E E FS+G+F L     IPLH+HPGM    K+L+GT+ I   D
Sbjct:    6 MASLIQRIARQACLTFRGSSTGSEGPAPGFPENLSLLKSLLTQVRAEDLNIAPRKA-LPQPLPRNLPPVTYMHIYETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMD 122          
BLAST of CX671378 vs. ExPASy Swiss-Prot
Match: AEDO_HUMAN (2-aminoethanethiol dioxygenase OS=Homo sapiens GN=ADO PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  325 PEKIERLKAVLDGIKPEDVSVMPEQPYFRRQAGRKYPAITYQHIFECEKFSMGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 588
            PE + +LK++L  ++ ED+++ P +   +       P +TY HI+E + FS+G+F L     IPLH+HPGM    K+L+GT+ I   D
Sbjct:   48 PENLSKLKSLLTQLRAEDLNIAPRKATLQ-PLPPNLPPVTYMHIYETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMD 134          
The following BLAST results are available for this feature:
BLAST of CX671378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AEDO_MOUSE3.654e-1336.442-aminoethanethiol dioxygenase OS=Mus musculus GN=... [more]
AEDO_HUMAN9.001e-1237.502-aminoethanethiol dioxygenase OS=Homo sapiens GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_10G02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10G02-M4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671378 ID=CX671378; Name=CX671378; organism=Citrus sinensis; type=EST; length=911bp
TTAGCTTATGTTTCTGGTGATTCTGTGTTGGCTCCCCTGTTTTTGAAGTG
AATTTGATTGTAATTTTGAGTTTTGGAGAGGTGAATGGGGATTGAGTCAA
CGCTGGCTGATTTAAAAGGGAAGCAGTTGAGTGAATTACCAAAGGTGACT
GCTGCTGGAACTTCGAATAGCAGCAATTCAGCTGCTAATAGGAATAGGAG
TAGGAATAAGCAGTCGAGGAAGAACCGCCGTCGCCAGAAGAAGATAATGG
TGTCACCGGTTCAGAGGCTATATGAAACTTGCAAGGACGTGTTTGCCAAT
TGTAGCGCTGGGATTGTTCCCTCTCCTGAAAAAATTGAGCGGCTGAAAGC
CGTTTTGGATGGCATAAAACCAGAGGATGTGAGTGTGATGCCGGAACAGC
CATATTTCCGTAGACAGGCTGGCCGGAAATACCCTGCGATAACATACCAG
CACATCTTTGAGTGTGAAAAATTCTCTATGGGGATCTTCTGCTTGCCACC
GTCAGGTGTCATTCCCCTTCACAATCACCCTGGAATGACAGTTTTCAGTA
AGCTTCTTTTTGGAACCATGCACATCAAATCGTATGACTGGGTGGTCGAT
GTCCCTAGCGACACATCGGCTGATGCGGCTGGTGTCCCTGGCAAAGACAC
ATCGGCTGATGCGGCTGGTGTCCCTGGCAAAGACACATCGGCTGATGCGG
CTGGTGTCCCTGGCAAAACATCTGCCGATGCAGTTGATGCCATCCCTGGC
GAAACATCAGCTGCTGCGGTTGATGGCATCCCTGGCAAGCCATTAGCTGC
TGCTGTAGATGCCGTCCCTGACAAAAATTCAGCTGATGCGGTTAACGACA
ATGGAAACACATCTGCTGATGCGGTTGATGTCCCTTCGAAAATGTCAACT
GATGCTCATCC
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