CX671364

Overview
NameCX671364
Unique NameCX671364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2273 contig Csv1_Contig2273:458..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1)

HSP 1 Score: 407.142 bits (1045), Expect = 5.500e-113
Identity = 203/230 (88.26%), Postives = 224/230 (97.39%), Query Frame = 1
Query:  100 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            MALAFDEFGRPFI+LR+Q++K+RLRG+DAQKAN++AGKAVARILR+SLGPKGMDKMLQ PDGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAG+LLEQAE+ L+RGIHPIRIAEGYEMASR+AVEHLERIAQKFEF +N+ EPLVQTCMTTL+SK+VNRCKR LAEIAVKAVLAVADLER+DVNLDLIKVEGKVGG+LEDTELIYGI +DKDM
Sbjct:    1 MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDM 230          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.689e-109
Identity = 200/230 (86.96%), Postives = 219/230 (95.22%), Query Frame = 1
Query:  100 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            MAL FDE+ RPFI+LR+QE+KSRL+GLDAQKAN++AGK+VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKLMVELSRSQDY+IGDGTTGVVVMAGSLLEQAEKLLERGIHPIR+AEGYEMASRIAV+HLE I+ K+EF   D+EPLVQTCMTTL+SK+V+RCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGG+LEDTEL+ GI VDKDM
Sbjct:    1 MALDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVQGIIVDKDM 230          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.402e-108
Identity = 197/230 (85.65%), Postives = 219/230 (95.22%), Query Frame = 1
Query:  100 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            MALAFDE+GRPFI+LR+QE+KSRL+GLDA KAN++A KA+ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKL+VELSRSQDY+IGDGTTGVVVMAG+LLEQAEKLLERGIHPIR+AEGYEMASRIAV+HLE I+ K+EF   D+EPLVQTCMTTL+SK+V+RCKR LAEI+VKAVLAVADLERKDVNLDLIKVEGKVGG+LEDTEL+ GI VDKDM
Sbjct:    1 MALAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEISVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVEGIIVDKDM 230          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.388e-86
Identity = 155/227 (68.28%), Postives = 195/227 (85.90%), Query Frame = 1
Query:  106 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA  +RTSLGP G+DKM+   DGDVTITNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL++I+ K    +N+ EPL+QT  TTL SK++N C R++AEIAV AVL VAD+ER+DV+ +LIKVEGKVGGRLEDT+LI G+ VDKD
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKD 233          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.485e-86
Identity = 154/227 (67.84%), Postives = 193/227 (85.02%), Query Frame = 1
Query:  106 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL++I+      + D EPL+QT  TTL SK+VN C R++AEIAV AVL VAD+ER+DV+ +LIKVEGKVGGRLEDT+LI G+ VDKD
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKD 233          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.485e-86
Identity = 154/227 (67.84%), Postives = 193/227 (85.02%), Query Frame = 1
Query:  106 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL++I+      + D EPL+QT  TTL SK+VN C R++AEIAV AVL VAD+ER+DV+ +LIKVEGKVGGRLEDT+LI G+ VDKD
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKD 233          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.485e-86
Identity = 154/227 (67.84%), Postives = 193/227 (85.02%), Query Frame = 1
Query:  106 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL++I+      + D EPL+QT  TTL SK+VN C R++AEIAV AVL VAD+ER+DV+ +LIKVEGKVGGRLEDT+LI G+ VDKD
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKD 233          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.668e-85
Identity = 154/227 (67.84%), Postives = 194/227 (85.46%), Query Frame = 1
Query:  106 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA  +RTSLGP G+DKM+   DGDVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL++I+      +N+ EPL+QT  TTL SK+VN C R++AEIAV AVL VAD+ER+DV+ +LIKVEGKVGGRLEDT+LI G+ VDKD
Sbjct:    7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDNVLVDINNPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKD 233          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.844e-82
Identity = 147/228 (64.47%), Postives = 192/228 (84.21%), Query Frame = 1
Query:  100 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783
            M+L FDE+G PFI++R Q+ K RLRG++A ++++ A K ++ I+++SLGPKGMDKM+ S DG+V +TNDGATILE M VDNQIAKLMV+LS+SQD EIGDGTTGVVV+AGSLLEQAE+L+E+GIHP RI EGYE A +IA EHL+ I+   EF  +++EPL++T MT L SK+VNR  R+++EIAVKAV++VADLERKDVNL+ IK+EGK GG+LEDT+L+ GI +DK
Sbjct:    1 MSLVFDEYGNPFIVIRDQQAKERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVSQDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIATEHLKTISDSIEFSKDNIEPLIKTAMTCLGSKIVNRFHRQMSEIAVKAVISVADLERKDVNLENIKLEGKEGGKLEDTQLVKGIIIDK 228          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.671e-77
Identity = 144/228 (63.16%), Postives = 191/228 (83.77%), Query Frame = 1
Query:  106 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            L FDE G+PFI++R+QE + R+ G++A K+++ A +AVA  LRTSLGP+G+DKML SPDGDVTITNDGATI+E+MDV + +AKLMVELS+SQD+EIGDGTTGVVV+AG+LLE+AEKL++RGIHPI+IA+G+++A + A+E L+ I+ KF   + + E LV+T  T+L SK+VNR  R+ AEIAV AVL+VAD+E KDVN ++IK+EGKVGGRLEDT L+ GI +DK M
Sbjct:    8 LLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFP--VENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTM 233          
The following BLAST results are available for this feature:
BLAST of CX671364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 460
Match NameE-valueIdentityDescription
TCPE_ARATH5.500e-11388.26T-complex protein 1 subunit epsilon OS=Arabidopsis... [more]
TCPE2_AVESA3.689e-10986.96T-complex protein 1 subunit epsilon OS=Avena sativ... [more]
TCPE1_AVESA1.402e-10885.65T-complex protein 1 subunit epsilon OS=Avena sativ... [more]
TCPE_MOUSE4.388e-8668.28T-complex protein 1 subunit epsilon OS=Mus musculu... [more]
TCPE_PONAB7.485e-8667.84T-complex protein 1 subunit epsilon OS=Pongo abeli... [more]
TCPE_MACFA7.485e-8667.84T-complex protein 1 subunit epsilon OS=Macaca fasc... [more]
TCPE_HUMAN7.485e-8667.84T-complex protein 1 subunit epsilon OS=Homo sapien... [more]
TCPE_RAT1.668e-8567.84T-complex protein 1 subunit epsilon OS=Rattus norv... [more]
TCPE_DICDI3.844e-8264.47T-complex protein 1 subunit epsilon OS=Dictyosteli... [more]
TCPE_CAEEL1.671e-7763.16T-complex protein 1 subunit epsilon OS=Caenorhabdi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10F06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F06-K12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671364 ID=CX671364; Name=CX671364; organism=Citrus sinensis; type=EST; length=790bp
ACTAAGCGAAAAAAGCACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAG
TGGAAGGGGGAGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAA
TGGCGTTAGCGTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAG
CAAGAAGAGAAGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGT
TTCGGCCGGCAAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCA
AAGGCATGGACAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACA
AATGATGGTGCCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGC
AAAGCTGATGGTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATG
GTACAACTGGCGTTGTTGTTATGGCTGGTTCACTTTTAGAGCAAGCTGAG
AAGCTTTTGGAACGGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGA
AATGGCTTCTAGAATAGCTGTTGAACATTTAGAACGTATAGCTCAGAAGT
TTGAGTTCGGGTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACT
ACTTTAAATTCGAAAATGGTGAATCGTTGCAAGCGCAGATTGGCTGAGAT
TGCTGTCAAAGCGGTTCTTGCTGTGGCAGACTTAGAGAGGAAGGATGTCA
ATTTAGATTTGATTAAAGTTGAGGGAAAAGTAGGGGGAAGGTTGGAGGAC
ACTGAGCTAATATATGGAATTACTGTTGACAAGGATATGA
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