EY692463

Overview
NameEY692463
Unique NameEY692463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2547 contig Csv1_Contig2547:99..619. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692463 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.420e-20
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 2
Query:    2 GLENPFKVGEADKEMGMNNGINVYAQMIDECDGLDKIENLQTHDNNEIYEKAVKILERYW 181
            GLEN  K+GEADK++G   G+NVYAQ+IDE +GL+KIENLQ+HDN EIYEKAVKILE YW
Sbjct:  436 GLENILKIGEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYW 495          
BLAST of EY692463 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.203e-19
Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 2
Query:    2 GLENPFKVGEADKEMGMNNGINVYAQMIDECDGLDKIENLQTHDNNEIYEKAVKILERYWAXXXXXXXXXXXXXXXXXXXXXXXATNQPNIPPGGFKFG 298
            GLEN  KVGEA+K +G  + +N YAQMID+ +GL+KIENLQ+HDN EIYEKAVK+LE YW                           QPN+P GGF FG
Sbjct:  441 GLENILKVGEAEKNLGAGD-VNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYW----LEEEDDAMPSGDNAQNGFNFGNQQPNVPSGGFNFG 534          
BLAST of EY692463 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.679e-19
Identity = 49/98 (50.00%), Postives = 58/98 (59.18%), Query Frame = 2
Query:    2 GLENPFKVGEADKEMGMNNGINVYAQMIDECDGLDKIENLQTHDNNEIYEKAVKILERYWAXXXXXXXXXXXXXXXXXXXXXXXATNQPNIPPGGFKF 295
            GLEN  KVGEA+K +G    +N YAQ+ID+ +GL+KIENLQ+HDNNEIYEKAVKILE YW                          NQ  +P GGF F
Sbjct:  435 GLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQFGG-NQAPVPSGGFNF 531          
BLAST of EY692463 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 2
Query:    2 GLENPFKVGEADKEMGMNNGINVYAQMIDECDGLDKIENLQTHDNNEIYEKAVKILERYW 181
            GLEN  KVGE DK +   + +NV++QMIDE +GL+KIENLQ+HDNNEIYEKAVKILE YW
Sbjct:  435 GLENILKVGETDKTLAAGD-VNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYW 493          
BLAST of EY692463 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16
Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = 2
Query:    5 LENPFKVGEADKEMGMNNGINVYAQMIDECDGLDKIENLQTHDNNEIYEKAVKILERYWAXXXXXXXXXXXXXXXXXXXXXXXATNQPNIPPGGFKF 295
            LEN   VGEA+K +G     N+YAQMIDE +GL+KIENLQ+HDNN+IY+KAVKILE +W                             N+PPG F F
Sbjct:  439 LENILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEEEGNDENHAPQSGFQF-----GSTNVPPGQFNF 530          
The following BLAST results are available for this feature:
BLAST of EY692463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
IMA_SOLLC1.420e-2073.33Importin subunit alpha OS=Solanum lycopersicum PE=... [more]
IMA1B_ORYSJ1.203e-1950.51Importin subunit alpha-1b OS=Oryza sativa subsp. j... [more]
IMA1_ARATH2.679e-1950.00Importin subunit alpha-1 OS=Arabidopsis thaliana G... [more]
IMA1A_ORYSJ1.470e-1770.00Importin subunit alpha-1a OS=Oryza sativa subsp. j... [more]
IMA2_ARATH1.244e-1646.39Importin subunit alpha-2 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692463 ID=EY692463; Name=EY692463; organism=Citrus sinensis; type=EST; length=521bp
GGGTCTTGAGAACCCTTTTAAGGTGGGTGAGGCTGACAAGGAAATGGGAA
TGAATAATGGGATTAATGTTTATGCCCAAATGATTGATGAGTGTGATGGA
TTAGATAAGATTGAGAATTTGCAAACCCACGACAACAATGAGATTTATGA
GAAGGCTGTGAAGATTTTGGAGAGATATTGGGCTGAGGAAGAGGAGGAAG
AGCAGCTTATCCAAGAAGGTGGTATTGGAAATCAGCAGCAGGGTTTTGGT
TTTGCAACCAACCAGCCCAACATTCCACCTGGTGGCTTCAAATTTGGTTG
AAGTAGTAGTTTGAGAATATCTTTACTAGCTTTATAGGGCATTGTTTCTC
CCATTGCAGTGAATTTTGGAATTTTCTATATTGTCTTGTCGTTGTCGCCA
AGGGTCAGGATTTTTGGTCTGGCACATAGGCTTTTTACTTTCATGGAATA
TGTTAAAACTTTTCGAGTTGACTTGCAGTTTTCAACTTGAAATTGTATTT
CTCAAAAAAAAAAAAAAAAAA
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